Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g2526 ATGGTGGGAGCTTATTACAGATTCCATTTCCCTCAATTGTCTCTCATTTCGACTCAACCTCGCTTTGACATGGCAAGTTTTAAGGAACTCTCAATGGGTGGAGTAGTCTTGAATAATTCGAGAAGAAATTCATCAGAGGAAAGAAAGAAGAAAGGTGATGAAGATGATTTAGGGTTTAAAAGAAAACTCAAACTTTGGTTTGGTTGCATGACACTGATGATCATGAGATCAAAAGCAAAAGATTCTGCGAGTGATCACAAATATAAAGCAGATGGAATAGAGGAGAAAATTATTGGTCCCATACCATCAACTCCAACCAATTCACCAATTATTAATGAAGAAAGGGTGGTTAATCCAAAAAGCTTTACATACAAACAGCTTAAATTGGCAACAAAAAATTTTAAGAGAGAGCATTTTCTTGGTGAGGGAGGATTTGGAAGTGTCTACAAAGGATGGCTTAGTAGAGATGATGCTATGACTCCAACAAAACCTGGAATGGGGATCCCTGTTGCTATAAAATCTCTCAACCAATTTGGTCTTCAGGGCCATCAAGAATGGCTGGCTGAAGTAAACTATCTGAGTCAGCTAAAGCACCCAAATTTAGTGAAACTAATTGGATTTTGCAATGAAGATGATAAGATGCTGCTTGTTTATGAGTTCATGCCTCGTGGAAGCCTTGAATCCCATCTCTTTAGGAGAGCTGTGGTGTTTCCATGGTCCATCAGAGTGAGAATAATGCTTGATGCTGCAAAGGGACTTGCATATCTTCATGAGAAGACTCAGAATAAGAATGCAGTCATTTTTCGAGACTTCAAGACTTCTAATGTTCTCTTGGACACGGAGTTCCATGCAAAGCTATCGGACTTTGGTTTTGCAAGGGATGGACCTGAGGGAGATAAAACTCACATATCAACTAGAGTCATGGGAACCCATGGCTATGCTGCCCCAGAATATGTCATGAATGGGCACCTGAGCACGAAGAGTGATGTGTATAGTTTTGGAGTGGTGATGCTAGAGATGGTGACAGGAAGGAAGGTGATAGACAGACAGAGGCCACATAGTGAGATGAACTTGGTGAGATGGGCACTGCCCTTAATAAGGGACAATGGAAGGAACAGCCATATACTCCTCATTGACCCAAGGCTTCATGGGCATTACTCCGCAAAGGCTTCCCTTAAGGCACTTAAGTTGGCCTCTCGCTGCCTCCGCTTCAACCCTTCCATGAGACCTACCATGGATTCAGTTGTTCAATCCATCATCAACTTCCCTCAAGAAGCCTCACCTCTTCCAATTCCTCCTCCTCCTCCTCCTCATCTTAATACTAACTCCAACAAGTATGGTCTTGTTTCTTCTGCTTCTGCTTCCAGGACCAACGTGCCCACTCGCTTTCAGGCTTCGCCGTGCCACCTCAACCACCACCACCAAGCTCATGTTGCTTCAACTTCATCAACTCCACCAAGGCCTAATGTTAGAATTGATCAAAGGCGTTGA 1491 0.4313 MVGAYYRFHFPQLSLISTQPRFDMASFKELSMGGVVLNNSRRNSSEERKKKGDEDDLGFKRKLKLWFGCMTLMIMRSKAKDSASDHKYKADGIEEKIIGPIPSTPTNSPIINEERVVNPKSFTYKQLKLATKNFKREHFLGEGGFGSVYKGWLSRDDAMTPTKPGMGIPVAIKSLNQFGLQGHQEWLAEVNYLSQLKHPNLVKLIGFCNEDDKMLLVYEFMPRGSLESHLFRRAVVFPWSIRVRIMLDAAKGLAYLHEKTQNKNAVIFRDFKTSNVLLDTEFHAKLSDFGFARDGPEGDKTHISTRVMGTHGYAAPEYVMNGHLSTKSDVYSFGVVMLEMVTGRKVIDRQRPHSEMNLVRWALPLIRDNGRNSHILLIDPRLHGHYSAKASLKALKLASRCLRFNPSMRPTMDSVVQSIINFPQEASPLPIPPPPPPHLNTNSNKYGLVSSASASRTNVPTRFQASPCHLNHHHQAHVASTSSTPPRPNVRIDQRR* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g2526 496 MobiDBLite consensus disorder prediction 475 489 - -
Ahy20g2526 496 SUPERFAMILY Protein kinase-like (PK-like) 119 449 IPR011009 -
Ahy20g2526 496 CDD STKc_IRAK 140 417 - -
Ahy20g2526 496 PANTHER OS01G0588500 PROTEIN-RELATED 104 464 - -
Ahy20g2526 496 Gene3D Transferase(Phosphotransferase) domain 1 221 427 - -
Ahy20g2526 496 PANTHER TYROSINE KINASE FAMILY PROTEIN 104 464 - -
Ahy20g2526 496 ProSitePatterns Protein kinases ATP-binding region signature. 140 173 IPR017441 GO:0005524
Ahy20g2526 496 Gene3D Phosphorylase Kinase; domain 1 119 220 - -
Ahy20g2526 496 Pfam Protein kinase domain 135 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g2526 496 MobiDBLite consensus disorder prediction 472 496 - -
Ahy20g2526 496 ProSiteProfiles Protein kinase domain profile. 134 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g2526 Ahy-Chr20 133125799 133133336 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g2526 67 419 Glycoside Hydrolase AT3G07070 44.715 1.07e-98 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Ahy20g2526 Pkinase 1.10E-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g2526 - - ahf:112786408 963.37