Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g2509 ATGGGGTTTGGGAATAATAAGAATAGTAGTAGCAGCAGCAGCAACCACAACAACAACAACAACAACAATAATAATAATAATAATAATAATAATGTTATTAAAGCTGGAAGTTTGGATGTGGGAAAATCAAAGGGAAGGAAGAAGGGAGAGAATGAGAAAGGGTGGTGGCCTAAATTTAGTTTCTTTGGGAGTTGCATACCTTCAAGATCGAAGGTTGTTACCTCCATTAGTGGCACTACTTCTACTCAAACTGCAGAAATCAAATCTGTGTCAGAGAGTTGCACGAAAGAAACTGTTGCTCCTCCAGAGTCCACTATGACAACAACAAGCAATGAAGAGAGTATTCCTTCCACTCCAAAAGTCAGTGAGGAGTTGAAGGTAGCTTCTTGTTTGAGAAAATTCACATTCAATGGACTTAAGGTGGCAACTCGGAATTTCAGACCGGAGAGTCTTCTTGGAGAGGGAGGGTTTGGTTGTGTATTCAAGGGTTGGATTGAGGAGAATGGAATTGCACCTGTTAAACCGGGTACCGGTCTTACCGTTGCAGTCAAGACCCTGAACCACAATGGAAATCAGGGTCACAAAGAGTGGCTTGCTGAATTAAACTATCTTGGTGATCTTGTCCATCCTAATCTTGTTAAATTGATTGGTTTCTGTATAGAAGATGACCAGAGATTATTGGTTTACGAGTTTATGCCCCGAGGCAGTTTGGAGAATCACCTCTTTAGAAGGCCCCTACCGCTTCCTTGGTCTATCAGAATGAAAATTGCACTTGGTGCTGCAAAAGGTCTTGCTTTTCTTCATGAAGAGGCTCAGAGGCCAATAATCTATCGCGATTTCAAGACATCCAATATCCTATTGGATGCGGAATACAATGCAAAGCTCTCTGATTTTGGACTTGCCAAAGATGGCCCTGAGGGGGAAAAGACACATGTATCAACAAGAGTCATGGGAACATATGGTTATGCTGCTCCGGAGTATGTCATGACCGGACATTTGACATCAAAAAGTGATGTCTACAGTTTCGGAGTGGTGCTTCTTGAAATGCTCACTGGCCGCCGAGCAATCGATAAGAGAAGACCAAATGGAGAACACAATCTGGTTGAGTGGGCTAGACCTGTTCTCGGAGATCATAGGATCCTATTCCGGATAGTCGATCCCCGGCTTGAAGGGCACTTCTCGGTTAAAGGTGCACAGAAAGCTGCCCAGCTAGCTGCTCAATGCCTTAGCCGCGACCCGAAATCCAGACCTTTGATGAGTGAAGTTGTTCAAAGTTTAAAGCCATTGCCAAACCTTAAGGATATGGCCATTTCTTCTTACCACTTCCAGGTCACGCGAGTCGAGCGTACTTTCTCCATGCCAAATCATAAAAACGGCATCAAAACGCAGTTAGTAGCTTTACCAAAGAAAGGTCAACCTGTAAGGACATTGTCAACTCCAAATGTTCCACATGGTTCTCCATATCTTAATTATAGCAAGTCTCCAAAACCAAAGGATCTCAGCTAA 1506 0.4329 MGFGNNKNSSSSSSNHNNNNNNNNNNNNNNNVIKAGSLDVGKSKGRKKGENEKGWWPKFSFFGSCIPSRSKVVTSISGTTSTQTAEIKSVSESCTKETVAPPESTMTTTSNEESIPSTPKVSEELKVASCLRKFTFNGLKVATRNFRPESLLGEGGFGCVFKGWIEENGIAPVKPGTGLTVAVKTLNHNGNQGHKEWLAELNYLGDLVHPNLVKLIGFCIEDDQRLLVYEFMPRGSLENHLFRRPLPLPWSIRMKIALGAAKGLAFLHEEAQRPIIYRDFKTSNILLDAEYNAKLSDFGLAKDGPEGEKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRAIDKRRPNGEHNLVEWARPVLGDHRILFRIVDPRLEGHFSVKGAQKAAQLAAQCLSRDPKSRPLMSEVVQSLKPLPNLKDMAISSYHFQVTRVERTFSMPNHKNGIKTQLVALPKKGQPVRTLSTPNVPHGSPYLNYSKSPKPKDLS* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g2509 501 PANTHER OS01G0588500 PROTEIN-RELATED 79 491 - -
Ahy20g2509 501 MobiDBLite consensus disorder prediction 474 488 - -
Ahy20g2509 501 CDD STKc_IRAK 152 429 - -
Ahy20g2509 501 Gene3D Phosphorylase Kinase; domain 1 126 231 - -
Ahy20g2509 501 MobiDBLite consensus disorder prediction 90 119 - -
Ahy20g2509 501 ProSitePatterns Serine/Threonine protein kinases active-site signature. 275 287 IPR008271 GO:0004672|GO:0006468
Ahy20g2509 501 SUPERFAMILY Protein kinase-like (PK-like) 121 426 IPR011009 -
Ahy20g2509 501 Pfam Protein kinase domain 149 424 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g2509 501 ProSitePatterns Protein kinases ATP-binding region signature. 152 184 IPR017441 GO:0005524
Ahy20g2509 501 Gene3D Transferase(Phosphotransferase) domain 1 232 447 - -
Ahy20g2509 501 MobiDBLite consensus disorder prediction 471 501 - -
Ahy20g2509 501 MobiDBLite consensus disorder prediction 1 51 - -
Ahy20g2509 501 MobiDBLite consensus disorder prediction 90 118 - -
Ahy20g2509 501 MobiDBLite consensus disorder prediction 1 36 - -
Ahy20g2509 501 PANTHER RECEPTOR-LIKE KINASE PLANT 79 491 - -
Ahy20g2509 501 ProSiteProfiles Protein kinase domain profile. 146 432 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g2509 Ahy-Chr20 132599108 132603771 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g2509 132 442 Glycoside Hydrolase AT3G07070 55.414 3.13e-115 344
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Ahy20g2509 Pkinase 4.40E-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g2509 - - gmx:100499647 800.045
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g2509 20 132599108 132603771 Ahy10g2024 10 107487427 107492118 hybridization
Ahy20g2509 20 132599108 132603771 Ahy14g2804 14 136400691 136404515 PCT
Ahy20g2509 20 132599108 132603771 Ahy4g2457 4 122009904 122013688 PCT
Ahy14g2804 14 136400691 136404515 Ahy20g2509 20 132599108 132603771 PCT
Ahy4g2457 4 122009904 122013688 Ahy20g2509 20 132599108 132603771 PCT