Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g2480 ATGGATCTCAAAAAACTCTTACTCTTCCTTTGTGTCTTAACCCCAGTCCTCTCTTCCTCACAGGGAACCGAAGAAGACGACGTGAAGTGTCTCAAAGGAATCAAGGACACTCTCCAAGACCCTCAGGGCCGACTCGCCACGTGGCGCTTCGGAAACACAACCGTCGGTTTCATCTGCGACTTCGTCGGCGTCACCTGCTGGAACCTCAAAGAGAATCGCGTCCTGGCTCTCGACCTTCAAGGCATGAAGCTCTCCGGTCAAATCCCTAGCTCCCTCAAATTCTGCGGTAAGAATATCCAGAAGCTGGATCTCGGTTCAAATTCTCTTTCTTCCAATATACCGCCCGAGATCTGCACCTGGATGCAGTTTCTCGTTTCGTTAGATCTCTCCGATAACCAACTTACCGGTCCGATTCCGCCTACTCTTGCTAACTGTACTTACTTGAATGAGCTTGTGCTTAATGATAACGAACTTTCTGGAACCATTCCGTACCAGCTTGGAAGTTTGACTAGGTTGAAGAAGTTATCTGTTGCTAATAACCGTCTTAGCGGAACGGTTCCTTCGTTCTTCAACGGTTTTGATAAGGATGGTTTCGATGGCAACGATGACCTTTGTGGTGGCCCGCTTGGCAACTGCGGTGGCATGAGCAAGAGGAATCTTGCTATAATTGTGGCTGCCGGTGTTTTCGGTGCTGCTGCGTCGTTGCTTTTGGCGTTTGGATTGTGGTGGTACTATCATTTGAGGGTCGGTGGGAGGAGGAAGAAGGGGTTTAGTGGTGGTGGTGGCGGTGGCGGTGGTGGTGGCAATGATTGGGTTGTGAGGTTGAGAGGGCATAAGCTTGTTCAGGTTACGCTTTTTCAGAAGCCGATTGTGAAGGTTAAATTGGGAGATTTAATGGCTGCGACGAATAATTTTAGTGCGGAGAATGTTTTGATTTCGACGAGGACTGGGACTACTTATAAGGCGGATTTGCCGGACGGTTCGGCTCTGGCAGTGAAGAGGTTGAGTGCTTGTAAGATTGGGGAGAAGCAGTTTAGGATGGAGATGAATAGGTTGGGGCAGGTGAGGCACCCGAATTTGGCACCATTGTTGGGTTTCTGTGTAGTGGAGGATGAGAGGTTGTTGGTTTATAAGCACATGTCAAATGGGACTCTTTATTCCTTGCTGCACAAGAATGGAGGGTTGTTGGATTGGATCATGAGGTTTAGGATTGGGGTTGGCGCTGCGAGGGGGCTAGCGTGGCTTCACCATGGCTGCCACCCTCCAATTATTCAGCAAAACATTTGTTCCAATGTGATCCTCGTCGACGAGGATTTCGATGCTAGGTTGATGGATTTCGGGCTTGCCAGGCTCATGGCATCGGATTCAAATGGGAGTTTCGTGAATGGGGATTTGGGGGAGTTAGGGTATATTGCACCGGAGTACTCGAGTACCTTGGTTGCTTCATTGAAAGGGGATGTGTATGGATTTGGGGTTTTGCTTTTGGAATTGGTCACAGGGCGAAAACCACTCGATGTTAGCAACGGGGAGGATGAGTTTAAGGGAAACTTGGTGGATTGGGTGAACATGCATTCGAGTATGGGCCGACTCAAGGACTGCATTGATAAGGCCATAGCCGGAAGGGGGCAGGACGAGGAGATCCTGCAGTTTCTGAAAATTGCATCTAATTGTGTGGTTAATCGCCCCAAGGATAGGTGGTCCATGTACAAGGTTTATCATTCATTGAAGAGTTTAAGCAAAGACTCAAGTTTGTTTGATCATGATGACGAGTTCCCCTTGATCTTTGGTAAGCCGGAAAACGAGTAG 1806 0.4867 MDLKKLLLFLCVLTPVLSSSQGTEEDDVKCLKGIKDTLQDPQGRLATWRFGNTTVGFICDFVGVTCWNLKENRVLALDLQGMKLSGQIPSSLKFCGKNIQKLDLGSNSLSSNIPPEICTWMQFLVSLDLSDNQLTGPIPPTLANCTYLNELVLNDNELSGTIPYQLGSLTRLKKLSVANNRLSGTVPSFFNGFDKDGFDGNDDLCGGPLGNCGGMSKRNLAIIVAAGVFGAAASLLLAFGLWWYYHLRVGGRRKKGFSGGGGGGGGGGNDWVVRLRGHKLVQVTLFQKPIVKVKLGDLMAATNNFSAENVLISTRTGTTYKADLPDGSALAVKRLSACKIGEKQFRMEMNRLGQVRHPNLAPLLGFCVVEDERLLVYKHMSNGTLYSLLHKNGGLLDWIMRFRIGVGAARGLAWLHHGCHPPIIQQNICSNVILVDEDFDARLMDFGLARLMASDSNGSFVNGDLGELGYIAPEYSSTLVASLKGDVYGFGVLLLELVTGRKPLDVSNGEDEFKGNLVDWVNMHSSMGRLKDCIDKAIAGRGQDEEILQFLKIASNCVVNRPKDRWSMYKVYHSLKSLSKDSSLFDHDDEFPLIFGKPENE* 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g2480 601 Gene3D Ribonuclease Inhibitor 24 213 IPR032675 -
Ahy20g2480 601 PANTHER OS07G0107800 PROTEIN-RELATED 5 595 - -
Ahy20g2480 601 PANTHER - 5 595 - -
Ahy20g2480 601 Pfam Protein kinase domain 317 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g2480 601 SUPERFAMILY L domain-like 25 194 - -
Ahy20g2480 601 SUPERFAMILY Protein kinase-like (PK-like) 282 575 IPR011009 -
Ahy20g2480 601 ProSiteProfiles Protein kinase domain profile. 305 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g2480 601 Gene3D Phosphorylase Kinase; domain 1 267 379 - -
Ahy20g2480 601 Pfam Leucine rich repeat N-terminal domain 25 67 IPR013210 -
Ahy20g2480 601 Gene3D Transferase(Phosphotransferase) domain 1 380 592 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g2480 Ahy-Chr20 131935393 131937832 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g2480 6 601 Receptor kinase-like Gene Family AT3G28450 61.360 0.0 754
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Ahy20g2480 Pkinase 5.50E-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g2480 - - gmx:100810378 921.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g2480 20 131935393 131937832 Ahy10g1997 10 106905870 106908357 hybridization