Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g2465 ATGGAATCACAAAGCAATAATAACAACCATGCATTAACTGATGCGTTTGAAAGATTTACCAAAGACTTTCGGGCAATCGTTGACGATATTTCTACCAACAACAACAACAATGCAACGAAGAAAAGGTGCAAGAGGTGCAATAAAAAAGTTGGGTTAATAGGGTTTGAGTGTCGATGTGGAGATTTGTTTTGTGGAAGGCATAGGTATCCAGAAGTTCATGAATGTGAATTCAATTTTAAGGATATTGGTCGCAACATTTTGACAAAACAGAACCCTCTTTGTATTCGTGATAAATTAGATGAAAGAATTTAG 312 0.3558 MESQSNNNNHALTDAFERFTKDFRAIVDDISTNNNNNATKKRCKRCNKKVGLIGFECRCGDLFCGRHRYPEVHECEFNFKDIGRNILTKQNPLCIRDKLDERI* 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g2465 103 Pfam AN1-like Zinc finger 43 78 IPR000058 GO:0008270
Ahy20g2465 103 PANTHER AN1-TYPE ZINC FINGER PROTEIN 17 103 - -
Ahy20g2465 103 SMART AN1_Zf_4 43 80 IPR000058 GO:0008270
Ahy20g2465 103 PANTHER ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 8-RELATED 17 103 - -
Ahy20g2465 103 SUPERFAMILY AN1-like Zinc finger 33 95 IPR035896 -
Ahy20g2465 103 Gene3D - 23 96 IPR035896 -
Ahy20g2465 103 ProSiteProfiles Zinc finger AN1-type profile. 37 83 IPR000058 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g2465 Ahy-Chr20 131033596 131033907 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g2465 24 101 C2H2 Transcription Factor Family AT3G52800 46.154 6.07e-23 85.5