Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g2442 ATGGTGTCTTCATGGAGTATTGCCTTTGCCACAATCGCTTTGGCAATCCTCATATACCGTATCGTCAAGTTTGTTACCCGGCCGTCGTTACCACTACCCCCGGGCCCAAAGCCGTGGCCAATAATAGGAAACTTGCCACACTTGGGCCCAGTGCCCCACCATGCTATTGCAGCCCTAGCCAAAGTGCATGGTCCTCTCATGCACCTTAGACTAGGGATGGTAGACGTGGTGGTGGCCGCATCGGCGAAAGTAGCGGAGCAGTTCTTGAAGGTGCACGACGCCAATTTCAGTAGCAGGCCCCCAAATGCAGGGGCAAAGTACATAGCATATAACTATCAAGATCTTGTGTTTGCACCTTACGGACCAAGGTGGAGGATGCTCAGGAAAATTAGCTCACTTCATCTTTTCTCTGCCAAGGCCTTGGATGATTTCAAACACTTGCGTCAGGGAGAGGTTGCAAGATTGACCAAGAACATAGCAAGTAGCACAGACACATCAAAAGCTGTGAACTTAGGACAACTGTTAAATGTATGCACCACAAATGCATTGGCCAGGGTAATGATAGGAAGGAGAGTGTTCAATGATGGAAATGGTGGGTGTGATCCAAGAGCTGATGAGTTCAAATCAATGGTCGTGGAGGTTATGGTTTTGGCTGGAGTCTTCAACATTGGTGACTTTATTCCTTGTTTGGAGTGGCTAGACCTTCAAGGGGTCCAAGCCAAGATGAAGAAATTGCATAAGAGGTTTGATTCATTCTTAACAAGCATTGTTGAGGAGCACAAGAAGAATCCCAACAAAAGTGAGAAGCATAAGGATATGTTGAGTACTTTGTTGTCACTTCAAGAGGCTTCCGATGATAATGATGGCACCAAACTCACAGACACCGAGATCAAAGCTTTGCTTCTGAATATGTTTACTGCAGGAACAGACACATCATCAAGCACTACAGAATGGGCAATTGCAGAACTAATAAGGAACCCAAGAATCATGGGGCAAGTCCAGAATGAATTAGACAGTGTAGTAGGAAGGGAAAGGCACGTGACAGAAGAGGACTTGCCCAATTTGCCATACCTTCAAGCAGTGGTCAAAGAAACCTTCCGTTTGCACCCATCAACCCCACTTTCCCTCCCAAGAGTGGCAGCAAAGAGCTGTGAGATCTTAGGGTACCACATCCCAGAAGGTGCAACGCTCTTGGTCAATGTTTGGGCCATAGCCCGTGATCCAAAGGAATGGGCTGAACCATTGGAGTTCAGGCCCGAGAGGTTCCTAAAGGGTGGTGAGAAGGCTGATGTTGATGTTAGGGGGAATGACTTTGAGGTCATTCCCTTTGGTGCTGGGAGAAGGATATGTGCTGGGATGACTCTTGGGCTTAGAATGGTTCAGCTCTTGACAGCAACCTTGGTCCACTCATTTGATTGGGAGCTTGAGGGTGGCCTTAAACAGGAGGACCTCAACATGGATGAAGCATATGGGCTTACCCTTCAACGAGCTTTGCCTCTTTCGGTGCATCCAAAGCCCAGGCTTTCTTCTCATGTTTACTCATCATCTGAATAA 1554 0.4743 MVSSWSIAFATIALAILIYRIVKFVTRPSLPLPPGPKPWPIIGNLPHLGPVPHHAIAALAKVHGPLMHLRLGMVDVVVAASAKVAEQFLKVHDANFSSRPPNAGAKYIAYNYQDLVFAPYGPRWRMLRKISSLHLFSAKALDDFKHLRQGEVARLTKNIASSTDTSKAVNLGQLLNVCTTNALARVMIGRRVFNDGNGGCDPRADEFKSMVVEVMVLAGVFNIGDFIPCLEWLDLQGVQAKMKKLHKRFDSFLTSIVEEHKKNPNKSEKHKDMLSTLLSLQEASDDNDGTKLTDTEIKALLLNMFTAGTDTSSSTTEWAIAELIRNPRIMGQVQNELDSVVGRERHVTEEDLPNLPYLQAVVKETFRLHPSTPLSLPRVAAKSCEILGYHIPEGATLLVNVWAIARDPKEWAEPLEFRPERFLKGGEKADVDVRGNDFEVIPFGAGRRICAGMTLGLRMVQLLTATLVHSFDWELEGGLKQEDLNMDEAYGLTLQRALPLSVHPKPRLSSHVYSSSE* 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g2442 517 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 443 452 IPR017972 GO:0005506|GO:0016705
Ahy20g2442 517 Gene3D Cytochrome P450 19 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy20g2442 517 Pfam Cytochrome P450 33 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy20g2442 517 PRINTS E-class P450 group I signature 84 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy20g2442 517 PRINTS E-class P450 group I signature 178 196 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy20g2442 517 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy20g2442 517 PRINTS E-class P450 group I signature 400 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy20g2442 517 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy20g2442 517 PRINTS E-class P450 group I signature 440 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy20g2442 517 PRINTS E-class P450 group I signature 359 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy20g2442 517 PRINTS E-class P450 group I signature 450 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy20g2442 517 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy20g2442 517 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy20g2442 517 PRINTS P450 superfamily signature 441 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy20g2442 517 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy20g2442 517 PANTHER FLAVONOID 3'-MONOOXYGENASE 5 505 - -
Ahy20g2442 517 SUPERFAMILY Cytochrome P450 33 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy20g2442 517 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 5 505 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g2442 Ahy-Chr20 130200874 130206211 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g2442 9 514 Cytochrome P450 AT5G07990 66.341 0.0 713
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g2442 K05280 - gmx:547475 835.869
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g2442 20 130200874 130206211 Ahy20g2442 20 130200874 130206211 ECH
Ahy20g2442 20 130200874 130206211 Ahy10g1959 10 105741762 105746890 hybridization