Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g2427 ATGGATGATCATAAATCTGAGGATCAACACCTGGTGGCGGCAGCGCAGCACATTTTAAAGGCGTTGGCGGCAAGCAAGGCTGTCTCCGATGATCTGAGAAAAACTCTCTTGGATTTCGATATTCACCTATCAGCCATGTCCATAGTTGAAAGGAGCATCAAGCAGCTAGAAAGGAAAATTAAATTTGCCGAAGGCAAAATAATGACTTGGAAAGCGAAGAATTCGATGATATGGGACTGCGGTTCCAAGGAATCTTCCGAGTATTTAGAAGCCGTTAGTGAGATTCAAGCAGCCGTTCACAACTTGCAGAGTTTGAATGAACACGATAAAGAACTACTCGGAAGAGCCAACGGAATCTTGCAGGTTGCCATGGCGAAACTGGAGGAAGAACTAGTTCATATCCTCGTTAAGCACAAGCAATACCTTGAACCGGAATCTTTCGCGAACGAGGCCGGTTCAGTTGATCTGGTTAATCCTGCGTTAATTCCAGATCTCAAGAGCATTGCAAATGTCATGTTCGGTTCCAAGTACCATCAGGAGTTTTGCCAGACTTTCATTTCTTCGAGACGCGACGCCTTGGACGAGTTCTTCGTGGTTCTTGAAATAGAAAGATTCAGCAACGAGAACGTCATGAAAATGGAAGGGAATTGCTTGAATCGCGAGATAAAGAAGTGGATTCGCGCCGTGAAGATAGTCTTTCAGGTGTATCTCGTCGCAGAGAAACGGTTGTGTAAGCAAATTCTTGGAGACTTCAACGACTCTGTTTATCAGTTCTGCTTCGCCGAGATAACTTTGAGTTTCGTGTTGAAACTTTTGAATTTTGGTGAGGCCGTAGCAATGGGAAACCGTTCACCGGAGAAACTGTTCTGTTTTCTAGACATCTATGAAGTTTTGGAGAATCTCGCTGTCTATGTAGACATTTTGTTCTTTGAAGAATTTGGTTCATTTGTAAGAGATGAGTTTCACAAGCTTCTAAACAAGTTTGGTGAAGCTTCAAAGTTCACATTTTTAGCATTTAAAAATGCTATTGCAAATGATCCTTCAAAGGCGCGATTCCCTGGTGGCGGAGTTCACCATCTTACCAAATATGTAATGAATTTCATCAAGACACTGGCGGAATATGGCGAGGCACTCAACCTTCTCCTGGCGGACGAGACTCCGGCCGACCCAGAAGGCAATGATGACGATGACAGCCATCCTTTGGCTGGCGAATTCTGGTCGGTGGCGGCCACTCTTGAATCCAACCTGATCAGTAAGTCCAAATTGTACAAAGATGTGGCATTGCAACATGTATTCATGATGAATAACATTCACTACATGGTCCAAAAGGCTAAGTCCTCGGAACTAAGCTTAGTGTTCGGCGATCGATGGCTTCGTCGGCACGTTGCCAAGTTCCGAGATAATGCTAGAAGCTATGAGAGGGTAACTTGGGGTCCAATACTCTCTATTCTGAAACAAGAAAACGCTGAATTGAATTGCACTTCTTCGAAGGAAAATCTAAAGAAAAAGTGCAAAGATTTCAATGCTTCTTTTAGTGAAACCTATAGGTCACAAACAGGGTGGTATATTCCAGATACTGAACTCCGTGAAGATGTACAAATCTCAATTTCTCAGAAAGTTGTTCATGCTTACCGGCAATTCACTGGGAGATATTCATCAACCATTGATGAGAAGTGGAAAAAGCACACTGTGGATGATATAGAGAACTATGTATTGGACCTTTTTGTAGGTTCACCAAAATCTTTGCATTATTTTTCATCATCAGCACAGATACTGAAAAGGGATAAGAGTGTTTGA 1797 0.4279 MDDHKSEDQHLVAAAQHILKALAASKAVSDDLRKTLLDFDIHLSAMSIVERSIKQLERKIKFAEGKIMTWKAKNSMIWDCGSKESSEYLEAVSEIQAAVHNLQSLNEHDKELLGRANGILQVAMAKLEEELVHILVKHKQYLEPESFANEAGSVDLVNPALIPDLKSIANVMFGSKYHQEFCQTFISSRRDALDEFFVVLEIERFSNENVMKMEGNCLNREIKKWIRAVKIVFQVYLVAEKRLCKQILGDFNDSVYQFCFAEITLSFVLKLLNFGEAVAMGNRSPEKLFCFLDIYEVLENLAVYVDILFFEEFGSFVRDEFHKLLNKFGEASKFTFLAFKNAIANDPSKARFPGGGVHHLTKYVMNFIKTLAEYGEALNLLLADETPADPEGNDDDDSHPLAGEFWSVAATLESNLISKSKLYKDVALQHVFMMNNIHYMVQKAKSSELSLVFGDRWLRRHVAKFRDNARSYERVTWGPILSILKQENAELNCTSSKENLKKKCKDFNASFSETYRSQTGWYIPDTELREDVQISISQKVVHAYRQFTGRYSSTIDEKWKKHTVDDIENYVLDLFVGSPKSLHYFSSSAQILKRDKSV* 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g2427 598 PANTHER EXOCYST COMPLEX PROTEIN EXO70 150 583 IPR004140 GO:0000145|GO:0006887
Ahy20g2427 598 Gene3D Exocyst complex component Exo70 68 583 - -
Ahy20g2427 598 PANTHER EXOCYST COMPLEX COMPONENT EXO70E2 150 583 - -
Ahy20g2427 598 PANTHER EXOCYST COMPLEX PROTEIN EXO70 19 148 IPR004140 GO:0000145|GO:0006887
Ahy20g2427 598 Coils Coil 46 73 - -
Ahy20g2427 598 SUPERFAMILY Cullin repeat-like 75 575 IPR016159 -
Ahy20g2427 598 Pfam Exo70 exocyst complex subunit 223 572 IPR046364 GO:0000145|GO:0005546|GO:0006887
Ahy20g2427 598 PANTHER EXOCYST COMPLEX COMPONENT EXO70E2 19 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g2427 Ahy-Chr20 129833812 129835608 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g2427 8 575 EXO70 exocyst subunit family AT5G61010 40.453 2.77e-154 456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g2427 K07195 - gmx:100791622 694.115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g2427 20 129833812 129835608 Ahy20g2427 20 129833812 129835608 ECH
Ahy20g2427 20 129833812 129835608 Ahy10g1947 10 105459041 105460831 hybridization