Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g2422 ATGGCTGCAAAGCTTCTGCATTCTTTGGCAGATGATAACCCAGATCTGCAGAAGCAGATTGGATGTATGACTGGGATTTTCCAGCTCTTCGATCGCCACCATGTTCTTGCGCCTCGCCATAAGAGGATTTCTGCTGGCAATCCTCACTTCGGTGATGGCAGCTTGGAAACAGATTCGAATAACATGCTCCATCAACAAACAACAATGGATATGAACCTCAACAAGGGTGTGAATGAAAAACAGAGAACTTCGACTGAATCGTCAAGACCATCCTTCTCTTCTTGTTCATCATCACTATCCTCTTTGGATTGTAAGGCCGAAGCTGAAGCTACTTTCGACGGGATTGTTTTTCCCGAAACTCTTTCAAGGGATGTAGTTATGAACGAAATAGCTATCTCTTCCCATTTAGCACGTCACACACTTGACCTTAGGGATGTAGTGAAGGATTCAATGTATAGGGAGCCCCGAGGGCTGTCGGTTAAGACTACTGCCAAAGAGGAAGCTGTCTTTCATACTATGAAGCACAAGGATTCTCCGCGACCTTTTCATCCGTTGAAAGCTGTTGATGGGTCTTATGGAGTTGGAATAGATGGGAAACAAAGTGTGCCTGTTGATCTAAATGATTCCATGCGAGTGCTTGCTAAACTTAGAGAGGCACCTTGGTATTATGGAGAAACCAGAGAACATCTGAGACTGTCGCATGAAGTGAAAGACGGAAAATGGTATTCAATCTCAAAGGATTCCCCTCGGTTTGCTTATGACAGAAGGGAAACTAGCCGTTTTTCTTTTGAATCCCACGACACTATCAAATCGACACCAAAGATAAGAGAATTTCCGAGACATTCACTAGATAGTAGGGAAGGCACGTGGCGCGGTCACAATGCCGAATCAAAACCAAGTCACCACTCAAGCAAAGCTTACAGCAGCACCTCCACCTCAAATAACAAAGTTTCTAGCCCGCAACAGTCTTCGACTATCCAGAGCCGGCCTCCGAGTGTTGTAGCAAAGTTAATGGGCTTGGAAGCATTGCCGGATTCTGCTTTGGCCAGTTATACTCAATCAAGTCCAGGTGAGACTTACACAGCTCAAGATAATGGTCAGTTTCCAATATCATCAAGAGATGGATTCACCCGGCCACTCCGAGTTTCTAGTTCCCCGAAAATCTCATTGAAAGACCCAACATCCCCTCGGCGGAAGAATGCTGATCTGGTTATGAAACCCATCTCAAGTGCTAGAGTTCCCATTGAGCCTGCACCATGGAAGCAGCAGGATGGAAATAGAAGCTCTCAGAAAACAAGTTCAACAGCAACAAAAGCTCCCGCAAGAACACCGGATTCATTTACCTCGGTTTATAGTGACATTGAGAAGAGATTGAAGGATCTTGAGTTCAAACAATCTGGAAGGGATCTCAGAGCATTAAAACAGATACTAGAAGCAATGCAAGAAAAGGGACTATTAGACAACAAAAAAGAAGAGCAAGCTCCAAATGTTGCTCGAAATCAAAGAGACTATGAACCAAAAGTTATCAATTTAATCGAGAATTCTACATCGACAAGGCATCAAAATCCCCAAGGAAACAATGCTCTGTCGTCTACAATCAAGGGATATGACTCGGCAAGAGCGTTTGAATCCCCGATAGTGATCATGAAACCTGCGAAACTTGTTGAGAAAACCAGGATTTCTGCTTCTTCAGTCACACCAATTGGTTCCCAGAAACTCCAGAGCAGTGGTGCATATGTAAATAAAAATGCTGTGTCTTCAACCGGGGAAGTGAAAGATCAGCCTCCTAACACTAGTCACTGCGACCGTGATGCTTCTACGAGTGCCATCGATAAGAAAGCAAGAAATGGGAAGGCTACGAAACAAGCACAAACACAAACAAGGTCTCAACAATTTCCAAGAGAGAATAGCCCGAGTTCGGTAAAGCACTCCAGATCTGTAAGCCCAAGAATGCAACAGAAGAAGTTGGAGTTAGATAAAAGAGCTCGTCCGCCTGCGCCACCAGTGGACTCAAACAAACCAAGAAGGCTAACTGGTAAGAAGACAGCAGAATTAGGTCCCCCGTCTGGAAAAATAAGGCCAAAAGGCCGCAACTCACGGCCTGGTGACGAGCAAATGAGCGAGGCAAGCACTGAATCAAGAAGCTTAAGTTGCCAAGGGGACGATGTTTCTCTGAAGTCCGATGGTATCACCGTCGATTCAAAGACGGATATTGAATTCACCAGCAGTCTAAGATCTGCTGAAATTGAAGATGGCCAGAGCCCATCCTTGAAGGCTATGAAGCAATTGGTTTCACAAACAGTGCAAAAATCATCTGAGAGGTTGGATCAGGATGAGACAATTGCTGAACTTGCAACCGTTGCCCCGGAGAATCCAAGTCCTATGTCATCTCCAGGAAAGAAGATACCGGAAGAGCGAAAAGCAGATAATGAGAATCAAGATCAGTGGAACGCTGCGGATAGCCTTTCTTTTAACAGCTCCGGCGAGATGAATCGCAAGAAACTGCAGAGCATAGATCATCTTGTTCAGAAGCTCAGACGGCTAAACTCTAGTCACGACGAAGCTAGAATCGATTACATTGCTTCGCTATGCGAAAACACAAATCCGGACCACAGATACGTATCTGAAATACTGTTGGCCTCAGGTCTCCTACTCAGAGATCTGAGTTCTGAATTGTTGACATTTCAACTGCACACGTCTGGTCATCCGATTAACCCGGAACTTTTCCTTGTACTGGAGCAGACGAAAGCGAGTAGTTTGCTTGCGAAAGAAGAAAGCACTGGAAAAGTTGCCTACCCGAAGCTAAACGCCGAGAAGTTTCACCGGAAACTCATCTTCGATGCTGTGAACGAGATCCTCGGTGTGAAACTAGGCTCCTCTACTGAGCTATGGTTTCAGCCCAGCACAGTCAAGCTCGCGAAGAAAACCGTTGGCGCGCAAAAGCTTCTCAAAGAACTATGCTTCGAGATAGAGAAAATGCAAGCCAAGAATCATGATTGCAGTTTAGAAGAGGAGGATAGTCTGAAAAGCATGCTAATGGAAGATGTCATGCATGGTTCTGAGAGCTGGACCGAATTCAACCGCGATTTACCCGGGGTTGTGTTGGATGTTGAGAGACTGATATTCAAGGACTTGGTCGACGAGGTTGTGATCGGCGAATCGGTTGGCTTGCGAGTCAAGTCATCGGCGCGGCGGCGGAGGCAGTTTAGGAAGTAG 3216 0.4562 MAAKLLHSLADDNPDLQKQIGCMTGIFQLFDRHHVLAPRHKRISAGNPHFGDGSLETDSNNMLHQQTTMDMNLNKGVNEKQRTSTESSRPSFSSCSSSLSSLDCKAEAEATFDGIVFPETLSRDVVMNEIAISSHLARHTLDLRDVVKDSMYREPRGLSVKTTAKEEAVFHTMKHKDSPRPFHPLKAVDGSYGVGIDGKQSVPVDLNDSMRVLAKLREAPWYYGETREHLRLSHEVKDGKWYSISKDSPRFAYDRRETSRFSFESHDTIKSTPKIREFPRHSLDSREGTWRGHNAESKPSHHSSKAYSSTSTSNNKVSSPQQSSTIQSRPPSVVAKLMGLEALPDSALASYTQSSPGETYTAQDNGQFPISSRDGFTRPLRVSSSPKISLKDPTSPRRKNADLVMKPISSARVPIEPAPWKQQDGNRSSQKTSSTATKAPARTPDSFTSVYSDIEKRLKDLEFKQSGRDLRALKQILEAMQEKGLLDNKKEEQAPNVARNQRDYEPKVINLIENSTSTRHQNPQGNNALSSTIKGYDSARAFESPIVIMKPAKLVEKTRISASSVTPIGSQKLQSSGAYVNKNAVSSTGEVKDQPPNTSHCDRDASTSAIDKKARNGKATKQAQTQTRSQQFPRENSPSSVKHSRSVSPRMQQKKLELDKRARPPAPPVDSNKPRRLTGKKTAELGPPSGKIRPKGRNSRPGDEQMSEASTESRSLSCQGDDVSLKSDGITVDSKTDIEFTSSLRSAEIEDGQSPSLKAMKQLVSQTVQKSSERLDQDETIAELATVAPENPSPMSSPGKKIPEERKADNENQDQWNAADSLSFNSSGEMNRKKLQSIDHLVQKLRRLNSSHDEARIDYIASLCENTNPDHRYVSEILLASGLLLRDLSSELLTFQLHTSGHPINPELFLVLEQTKASSLLAKEESTGKVAYPKLNAEKFHRKLIFDAVNEILGVKLGSSTELWFQPSTVKLAKKTVGAQKLLKELCFEIEKMQAKNHDCSLEEEDSLKSMLMEDVMHGSESWTEFNRDLPGVVLDVERLIFKDLVDEVVIGESVGLRVKSSARRRRQFRK* 1072
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g2422 1071 MobiDBLite consensus disorder prediction 586 604 - -
Ahy20g2422 1071 MobiDBLite consensus disorder prediction 350 391 - -
Ahy20g2422 1071 Pfam DUF761-associated sequence motif 318 346 IPR032795 -
Ahy20g2422 1071 MobiDBLite consensus disorder prediction 422 448 - -
Ahy20g2422 1071 MobiDBLite consensus disorder prediction 789 823 - -
Ahy20g2422 1071 MobiDBLite consensus disorder prediction 619 647 - -
Ahy20g2422 1071 MobiDBLite consensus disorder prediction 350 448 - -
Ahy20g2422 1071 MobiDBLite consensus disorder prediction 586 753 - -
Ahy20g2422 1071 MobiDBLite consensus disorder prediction 77 97 - -
Ahy20g2422 1071 MobiDBLite consensus disorder prediction 703 750 - -
Ahy20g2422 1071 PANTHER LONGIFOLIA PROTEIN 1 1068 - -
Ahy20g2422 1071 MobiDBLite consensus disorder prediction 272 300 - -
Ahy20g2422 1071 Pfam Domain of unknown function (DUF4378) 870 1048 IPR025486 -
Ahy20g2422 1071 MobiDBLite consensus disorder prediction 272 330 - -
Ahy20g2422 1071 PANTHER LONGIFOLIA PROTEIN 1 1068 IPR033334 GO:0051513
Ahy20g2422 1071 MobiDBLite consensus disorder prediction 650 666 - -
Ahy20g2422 1071 MobiDBLite consensus disorder prediction 301 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g2422 Ahy-Chr20 129484734 129489653 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g2422 127 1065 TRM (TON1 Recruiting Motif) Superfamily AT1G74160 45.787 0.0 615
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g2422 - - gmx:100787391 1399.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g2422 20 129484734 129489653 Ahy20g2422 20 129484734 129489653 ECH
Ahy20g2422 20 129484734 129489653 Ahy10g1935 10 105044416 105049192 hybridization
Ahy11g2031 11 129391115 129396526 Ahy20g2422 20 129484734 129489653 PCT
Ahy1g2888 1 109730515 109736180 Ahy20g2422 20 129484734 129489653 PCT
Ahy20g2422 20 129484734 129489653 Ahy11g2031 11 129391115 129396526 PCT
Ahy20g2422 20 129484734 129489653 Ahy1g2888 1 109730515 109736180 PCT