Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g2392 ATGGGCAAGACAATCAGTTTGTCACTGGATGAAAGTGAATCTAAGTTAGGCCTTTCAAACAATGATGTTGTTGACAAGGATGACTTAGAAAAGGCTGAGTTGTTGTCAAATGAGGATGGTCGTGAATATGAAGACATGACTGGGTTGAGTGCAAAGGATATAATGAAAAATGTGTTTCGAAGTGAAGAGCATGCGAATGAGTTTTATTTGAAGGTAGGAAAATGCAAGAGATTTGGGGTCCGTAAGGGAGACTATGCGAAGGATGAAGATGGGACTATAGTGAGAAAAAGGTTCTTCTATAACAGGGCTGACCTAAGGGATGAAAAGCACTACAACAAATTAGATAGGAAGAGATCTCATAGGCCTGAGACACGCACAAATTGCCAGGCCCTTATGTCTGTATACCTTGATAAGGGGAGCTCAATTTGGAAGGTTCGAAAAGTAATCCTCGAGCATAACCATGAATTGATGCATAGGGGAATGATTCACATGATCCGAAGTTTCTGGGCAATATCTAGTTCCGCAAAGGCCCACATGGATGGAATGCATGCGTATGGCTTGCCAACGTCTAAGATATTAGGGTACATGGCTGGGATTGTGGGTGGTTATTCTTGTTTGGGTTTTACCAAGAAGGACGCATACAACTATATTGATCGTTCGAAGCATGCAAAGGTTGTTGATGGAGACATGAACGCTGCTATAGTCTACCTGGAAGGCAAGGCAGCTGCTGATCCTATGTCTATCGCCCGGTACAATTTGACTGAAGAAGGTATGTTGGCAAACATGTTTTGGGAAAATGGTCCTAGCAGGGTTGATTTTCAACACTTCGGGGACGTGGTTGCATTCGATTCGACATATAAGAAGAACAAATACAACATACCTCTTGTCATATTCTTCGGTTCAAACAACCATAAGCAAACAATAAGTTTTTGTTTTGGTTTGGTTTTAGATGAGACAATCGATTCATACAGGTGGATGTTGGAGAACTTGTTAGAAGTCATGTGTGGCAAGATGCCCTCTATTGTCGTGACTGACGGGATGAATCAATGA 1050 0.419 MGKTISLSLDESESKLGLSNNDVVDKDDLEKAELLSNEDGREYEDMTGLSAKDIMKNVFRSEEHANEFYLKVGKCKRFGVRKGDYAKDEDGTIVRKRFFYNRADLRDEKHYNKLDRKRSHRPETRTNCQALMSVYLDKGSSIWKVRKVILEHNHELMHRGMIHMIRSFWAISSSAKAHMDGMHAYGLPTSKILGYMAGIVGGYSCLGFTKKDAYNYIDRSKHAKVVDGDMNAAIVYLEGKAAADPMSIARYNLTEEGMLANMFWENGPSRVDFQHFGDVVAFDSTYKKNKYNIPLVIFFGSNNHKQTISFCFGLVLDETIDSYRWMLENLLEVMCGKMPSIVVTDGMNQ* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g2392 349 Pfam FAR1 DNA-binding domain 67 157 IPR004330 -
Ahy20g2392 349 PANTHER OS02G0262500 PROTEIN 52 346 - -
Ahy20g2392 349 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 52 346 IPR031052 GO:0006355
Ahy20g2392 349 Pfam MULE transposase domain 279 346 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g2392 Ahy-Chr20 128442260 128443309 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy20g2392 FAR1 2.00E-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g2392 - - aip:107633916 586.26