Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g2369 ATGGCTCCTCCGTGGGTCCAAGAGCTCCATCTGCCTCATCTCACCGTTCCCGTTACCATCGACGCCATGTACCCTGTCATGCCATCGCACCCTATACCCGTCCAATATGGAGACACCCTCTACCTCTCCAACCTCGACGACATGATCGGAGCTCGTGTCTTCACACCCACCGTGTACTTTTACCAACAAACCACCGCCAACAGTTGTGCCAATTCACAAAAACCCATAGTCAAAACACTTCAAGATGCCCTTGCTGATGTCTTGGTCCCTTACTACCCTCTCTCAGGGAGGCTAAGGGAAACCAGCAATGGGAAATTAGAAGTGTTCTTTGGTCCAAGCCAAGGTGCACTCATGGTTGAGGCACATTCCGATGTGGCTTTATCCGAATTAGGAGACCTCACTGCACCAAACCCAACTTGGGAGCCATTAATCTTCAAGTTCCCTGATGAAGAGCCATACAAAGTCCTTGATATGCCGCTTGTAATAGCACAAATCACAATCTTCCGCTGCGGCGGATTTAGCCTTGGGTTGCGACTCTGTCATTGCATCTGTGACGGCCTAGGAGCCATGCAGTTTCTAGGCGCATGGGCTGCAACTGCAAAGGCTAGGACTTTGGTAACAAATCCAAGGCCAATTTGGGATAGAGAGGTTTTCAAACCCCGTGACCCTCCTCATATACAATTTCCCCACATGGAGTTTATGAAAATTCAAGAAGGCTCAAATCTCACAATGTCGTTATGGGAAACTAAACCGTTACAAAAGTGCTATCGCATCACGCGCGAGTTCCAAAACCTTATAAAATCCCTTGCCATGCCACGTGACGGTTATGGCTGCACAACATTCGACGCAATGGCTGCACATGTGTGGAGGTCGTGGGTCAACGCCCTCGATGTGAGACCATTGACCTACGACTTAAGGTTGACATTTTCTGTCAATGCAAGACAAAAGCTCCGGAACCCACCCTTGAAGGAAGGGTTCTACGGCAATGTAGTGTGTGTACCTTGCACAACAAGCAAAGTTTCAGAGCTTGTGAACCCTGAACGGCTTTCAGAGACAACGAGGTTGGTTCGAGAAGCAAGGCTAAGCGTGTCGGAGGAATATTTGAGGTCAACGGTGGATTTCGTTGACTTGGAGAGGCCAAAGCAACTAGAGTTTGGAGGGAAGCTAACAATAACTCAGTGGACAAGGTTTTCAATATACAGGTGTGCAGATTTCGGGTGGGGAAGGCCACTATATGCTGGTCCTATAGACTTGACTCCTACGCCTCAAGTTTGTGTTTTTTTGCCCGAAGGACAAGATGGTAGTGGTGGTGATTCTTGTTCCGGTGGTGGTTCTATGATTGTGTGTATATGTTTGCCAGAATCTGCTGCTCATAAGTTTACTCAAGCATTCATGTTGTTGGATGACTCAAAATTCACACATTAG 1425 0.4793 MAPPWVQELHLPHLTVPVTIDAMYPVMPSHPIPVQYGDTLYLSNLDDMIGARVFTPTVYFYQQTTANSCANSQKPIVKTLQDALADVLVPYYPLSGRLRETSNGKLEVFFGPSQGALMVEAHSDVALSELGDLTAPNPTWEPLIFKFPDEEPYKVLDMPLVIAQITIFRCGGFSLGLRLCHCICDGLGAMQFLGAWAATAKARTLVTNPRPIWDREVFKPRDPPHIQFPHMEFMKIQEGSNLTMSLWETKPLQKCYRITREFQNLIKSLAMPRDGYGCTTFDAMAAHVWRSWVNALDVRPLTYDLRLTFSVNARQKLRNPPLKEGFYGNVVCVPCTTSKVSELVNPERLSETTRLVREARLSVSEEYLRSTVDFVDLERPKQLEFGGKLTITQWTRFSIYRCADFGWGRPLYAGPIDLTPTPQVCVFLPEGQDGSGGDSCSGGGSMIVCICLPESAAHKFTQAFMLLDDSKFTH* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g2369 474 Pfam Transferase family 17 464 - -
Ahy20g2369 474 Gene3D - 16 235 IPR023213 -
Ahy20g2369 474 Gene3D - 243 466 IPR023213 -
Ahy20g2369 474 PANTHER F21B7.2 12 468 - -
Ahy20g2369 474 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 12 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g2369 Ahy-Chr20 127909152 127910928 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g2369 26 466 Monolignol Biosynthesis Gene Families AT5G48930 28.571 2.69e-48 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g2369 K15400 - gmx:100802814 771.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g2369 20 127909152 127910928 Ahy10g1892 10 103810787 103812616 hybridization