Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g2333 ATGGTGTTTGCCACGCTGTCACGGGCAGACAACGATACTCAAATTCTTTTGCGGTTCAAGAACTCGTTGTCCGATGCCGGCGCCTTACAAAACTGGGACGAGTCAATCAATATTTGCAGCTGGACCGGCTTGTTATGCAAAGATGACAAACTTCATGGACTAAAGCTAGAAAACATGGGATTAAGTGGCACCATTGACATAGACATTCTTTCCGAATTGTCTATTTTGAATAGCTTTAGTGTGATTAACAACAACTTTGAGGGTCCAATGCCGGAGTTCAAGAAGCTTGAGAGGCTAAGAGGATTGTTTCTTTCCAATAACAAATTCTCCGGCCAGATTCGCGACGGTGCGTTCGACGGCATGAGGAGGCTGAAGAGGGTATTCTTGGCGGAAAACGAGTTCAGCGGCCATATTCCTAGCTCTCTTGCTCAATTGCCAAGGCTTTTGGACGTGGACTTGCATGGAAATAGATTTGATGGTACCATACCTGAATTTGAGAATAGCGATTTTAGGGTTTTTAATTTATCAAACAATCAATTGGAGGGTTCAATTCCAAAAAGCTTGAGCAATGTGGATCCAAGTGCATTTGCTGGTAACAAAGGACTATGTGGAAAACCTCTAAGCAACCCTTGCAGCAATAATGAACAACCCACCCCTCAAAATGACAACAAAACTAACAAACATCGCACACTAATAATTATAATTATCATAGTGGTAATTGTGGTTATCTTAGTTCTAATCCTAGCACTCTTCATAATCATAAATCGCAGAAGAAAAGCCAAAAACCCTAATCAGCTGGTAGAGGCTGCAAATGCATCAAAACATCAGAGTAGTGTTGCAGTTTCAAGTGATGAGGCCAAGATAGCGACATCCATGGAGGCAAGGGCATCCATTGAGCCAAGTATATCAATAGAAACAAAATCCATAGACATGGCTGCGACTGAGGCTGAGGCTGCGACAGCCGTGTTATCCATTCAGAGTGTTGAAGATGGTGGCGGCGGCCACGGAGGAGGAGGAGGAGGAGACTTTAACTTTGTGAGGGAAGATAGAGAGGTTTTTGATCTGCAATACCTGCTGAGGGCCTCGGCCGAGGTCCTCGGCAGTGGAAGCTTTGGATCAACCTACAAAGCTATGATTCATAGTGGTCAAGTTGTGGTGGTGAAGAGGTTCAAGAACATGAACAAGCTTGGAAAACAAGAATTCTTTGAGCACATGAGAAGGCTTGGGAGGTTGACACACCCTAATGTGCTCCCTCTAGTTGCATTCTACTATGGAAAAGAAGAGAAGCTTTTGGTCTATGACTTTGTTCAAAATGGGAGTTTGGCTAGTCATCTTCATGGTAAACGAAGTTTAGCGTTAGATTGGCCAACTCGTTTGAAGATCATAAAAGGAGTAGCAAGAGGCTTAGCATACTTATACAAGGAATTTCCAGACCAAAAGCTGGCCCATGGACACCTCAAATCCTCAAATGTTTTGTTAGATCATGCATACAAGCCTCTTTTAACAGAATACCAACTCGTGCCAGCAATAAACAAAAGCCACGCCCAGCAATTCATGGCAGCGTTCAAGTCTCCCGAGGGAAGCCAGCACGACAGTCCTGGCGACAAGACTGACGTGTGGTGCCTCGGGATCCTTATACTGGAGTTGCTGACAGGAAGGTTTCCTGCAGATTACGTGAGGCACGGAAAGGGTGCGAGCGAGGAGCTAGAGACATGGGTGAAATCTATTGTGAGTGGGGAGGTGATTGATAAGGACATGGTTGGAGGAAGCAATGGTCAAGGGGAGATGTTGAAGATGTTGAGGGTTGGGATGGGGTGTTGTGAGTGGAATGAGGGGAGTAGGTTGGAATGGAAGGAAGCTGTAGCCATGATTGAGGAGGTGAAAGAGAAAGATAATATGGAAGATGAATCTTCTGGTTTTAGTGAGTGGGACTTGTCCTTTTATTCGGAAACTCTTTAG 1959 0.4477 MVFATLSRADNDTQILLRFKNSLSDAGALQNWDESINICSWTGLLCKDDKLHGLKLENMGLSGTIDIDILSELSILNSFSVINNNFEGPMPEFKKLERLRGLFLSNNKFSGQIRDGAFDGMRRLKRVFLAENEFSGHIPSSLAQLPRLLDVDLHGNRFDGTIPEFENSDFRVFNLSNNQLEGSIPKSLSNVDPSAFAGNKGLCGKPLSNPCSNNEQPTPQNDNKTNKHRTLIIIIIIVVIVVILVLILALFIIINRRRKAKNPNQLVEAANASKHQSSVAVSSDEAKIATSMEARASIEPSISIETKSIDMAATEAEAATAVLSIQSVEDGGGGHGGGGGGDFNFVREDREVFDLQYLLRASAEVLGSGSFGSTYKAMIHSGQVVVVKRFKNMNKLGKQEFFEHMRRLGRLTHPNVLPLVAFYYGKEEKLLVYDFVQNGSLASHLHGKRSLALDWPTRLKIIKGVARGLAYLYKEFPDQKLAHGHLKSSNVLLDHAYKPLLTEYQLVPAINKSHAQQFMAAFKSPEGSQHDSPGDKTDVWCLGILILELLTGRFPADYVRHGKGASEELETWVKSIVSGEVIDKDMVGGSNGQGEMLKMLRVGMGCCEWNEGSRLEWKEAVAMIEEVKEKDNMEDESSGFSEWDLSFYSETL* 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g2333 652 Gene3D Ribonuclease Inhibitor 118 215 IPR032675 -
Ahy20g2333 652 SUPERFAMILY Protein kinase-like (PK-like) 364 627 IPR011009 -
Ahy20g2333 652 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 9 637 - -
Ahy20g2333 652 PANTHER POLLEN RECEPTOR-LIKE KINASE 5 9 637 - -
Ahy20g2333 652 Pfam Leucine rich repeat N-terminal domain 9 46 IPR013210 -
Ahy20g2333 652 ProSiteProfiles Protein kinase domain profile. 360 652 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g2333 652 Pfam Protein kinase domain 363 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g2333 652 Pfam Leucine rich repeat 98 158 IPR001611 GO:0005515
Ahy20g2333 652 SUPERFAMILY L domain-like 11 191 - -
Ahy20g2333 652 Gene3D Transferase(Phosphotransferase) domain 1 436 644 - -
Ahy20g2333 652 ProSitePatterns Protein kinases ATP-binding region signature. 366 388 IPR017441 GO:0005524
Ahy20g2333 652 Gene3D Ribonuclease Inhibitor 10 117 IPR032675 -
Ahy20g2333 652 Gene3D Phosphorylase Kinase; domain 1 348 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g2333 Ahy-Chr20 126905381 126911420 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g2333 1 644 Receptor kinase-like Gene Family AT5G35390 45.358 0.0 544
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Ahy20g2333 Pkinase 2.10E-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g2333 - - adu:107470884 1211.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g2333 20 126905381 126911420 Ahy20g2333 20 126905381 126911420 ECH
Ahy20g2333 20 126905381 126911420 Ahy10g1862 10 103046566 103051727 hybridization