Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g2317 ATGGATCCACCAAAGAAATCTAACAAGATCAAGGACATTGTCAGGCTTCAACAGATCCTCAAGAAATGGAGAAGGATTGCCAACTCTTCAAAATCAAGTGACAACAACAACAACAACAATCATAGCGGCAGCACCAGCAGTAAAAGCATCAACTTTCTGAAAAGGACACTTTCTTTGTCCGAACGTGACAAAGGATCGTCGAGCAATGCAGTTCCAAAAGGCTACTTAGCTGTTTGCGTCGGACTAGAGCTCAAGAGATTTGTCATACCCACTGTATATTTGGGTCACCAAGCCTTTCACATGTTGCTAAGAGAAGCTGAAGAAGAGTTCGGGTTTGAGCAGACCGGCGTTCTGAGGATTCCTTGTGAAGTATCTGTGTTTGAGAGTGTCCTGAAGATGGTGGAGGAAAAGGACAAGTTTTCGGCTCACAATTGCGGATTATTCAGTGTAGAAAAGATGATGATGGGGTACTGCTCCTTCAATCAGCTTACTTATTCGCATCATCCTCAAAGTCCTATGTGCAGATAG 528 0.4356 MDPPKKSNKIKDIVRLQQILKKWRRIANSSKSSDNNNNNNHSGSTSSKSINFLKRTLSLSERDKGSSSNAVPKGYLAVCVGLELKRFVIPTVYLGHQAFHMLLREAEEEFGFEQTGVLRIPCEVSVFESVLKMVEEKDKFSAHNCGLFSVEKMMMGYCSFNQLTYSHHPQSPMCR* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g2317 175 Pfam Auxin responsive protein 22 134 IPR003676 GO:0009733
Ahy20g2317 175 MobiDBLite consensus disorder prediction 27 48 - -
Ahy20g2317 175 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 6 175 IPR003676 GO:0009733
Ahy20g2317 175 PANTHER OSJNBA0060N03.10 PROTEIN 6 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g2317 Ahy-Chr20 126671297 126672569 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g2317 5 175 Calmodulin-binding Proteins AT2G24400 55.615 7.78e-58 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g2317 K14488 - aprc:113865930 243.817
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g2317 20 126671297 126672569 Ahy10g1848 10 102825975 102827436 hybridization
Ahy20g2317 20 126671297 126672569 Ahy16g3010 16 145173731 145174555 PCT