Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g2313 ATGGCGGCGACGGAGTCGGATCTTGAATGGTGGAGGACGATGATCGGATTCGACGAAGCATCCAACGGATCTCCCAACGGGGACGACGTCAAGCCCGCCGACTTGAGAGGCAGCGGCGTTTTTTCCGCCACCGTCCTCACCGGCGGATTCTCCGGCTATGTCGGTGACGGCGCCGAAAATCCGGACTATGTGGTAAATTCATTTTCAACTTGTGGGGGAATAGCAGATGCCAATACAGTTGTCTGTTCCCAAAACGTCATTACCAAGAATTCCACCATTTCTGCTACTAATGATTCCCAGTCATCCATGTGTGGCACTGTTGGAAGCCCGGTATCTTCTAATAAACCAAGTGACAGAGACAATCAAGCCAAAGTAGCTACAAGTGGTTCCTCTGAACCTTCTGATGAGGATGATGAAACTGGTCCTTGTGAACAAAGCACAAATCCTGTTGATGTGAAGCGCCTTAGAAGGAAGGAATCTAATCGCGAATCTGCAAGGAGGTCAAGAAGAAGAAAACAAGCGCATTTAGCTGACCTTGAGATGCAGGTTGAAAAGCTGAAACTGGAAAATGCAACCCTATACAAGCAGTTTAATGATGTTAGACAACAATTTCATGAGGCGGATACTAATAACCGAGTGCTAAAATCAGATGTTGAAGCCTTGAGAGCTAAGGTGAAGTTAGCCGAGGATATGGTCACTCGAGGCTCTGTTACCACCTTAAACAACCAACTTCTTCAGCCTCATTCTCAACTGAGCGCGCCACCACAGCTTAACACGACGACTAGTAGTCTGCGTCATATGGCTCACGTGTCGCCGACCATCACTGTCCATGCAAACGATGCCTTATACAATAATGGTGGTGGTGGAGGTGGACAGAATCATCCAGGTCTTGGTGGGCTGGGAGACTTGGATATTCCTTACAATGACATCAACAATGGAGTCATAAACGATGCTCTAAACTCCATGAACATCTGGCAGCAGTAA 984 0.4766 MAATESDLEWWRTMIGFDEASNGSPNGDDVKPADLRGSGVFSATVLTGGFSGYVGDGAENPDYVVNSFSTCGGIADANTVVCSQNVITKNSTISATNDSQSSMCGTVGSPVSSNKPSDRDNQAKVATSGSSEPSDEDDETGPCEQSTNPVDVKRLRRKESNRESARRSRRRKQAHLADLEMQVEKLKLENATLYKQFNDVRQQFHEADTNNRVLKSDVEALRAKVKLAEDMVTRGSVTTLNNQLLQPHSQLSAPPQLNTTTSSLRHMAHVSPTITVHANDALYNNGGGGGGQNHPGLGGLGDLDIPYNDINNGVINDALNSMNIWQQ* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g2313 327 MobiDBLite consensus disorder prediction 95 130 - -
Ahy20g2313 327 CDD bZIP_plant_GBF1 154 205 IPR045314 GO:0003700|GO:0006355
Ahy20g2313 327 Coils Coil 211 231 - -
Ahy20g2313 327 SUPERFAMILY Leucine zipper domain 152 205 IPR046347 GO:0003700|GO:0006355
Ahy20g2313 327 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 156 171 IPR004827 GO:0003700|GO:0006355
Ahy20g2313 327 PANTHER BZIP TRANSCRIPTION FACTOR 61 326 - -
Ahy20g2313 327 Coils Coil 162 203 - -
Ahy20g2313 327 Pfam bZIP transcription factor 152 203 IPR004827 GO:0003700|GO:0006355
Ahy20g2313 327 Gene3D - 152 209 - -
Ahy20g2313 327 PANTHER BASIC LEUCINE ZIPPER 63 61 326 - -
Ahy20g2313 327 SMART brlzneu 149 213 IPR004827 GO:0003700|GO:0006355
Ahy20g2313 327 MobiDBLite consensus disorder prediction 95 174 - -
Ahy20g2313 327 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 151 214 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g2313 Ahy-Chr20 126455076 126459648 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g2313 98 300 bZIP Transcription Factor Family AT5G24800 53.589 2.69e-57 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Ahy20g2313 bZIP_1 5.60E-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g2313 K25784 - gmx:780555 300.056
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g2313 20 126455076 126459648 Ahy20g2313 20 126455076 126459648 ECH
Ahy20g2313 20 126455076 126459648 Ahy10g1843 10 102712972 102718683 hybridization
Ahy20g2313 20 126455076 126459648 Ahy16g3005 16 145092702 145098993 PCT