Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g2284 ATGTTTTCAGTTGCGCCTTTGACTCCGGCAAGTTCACCGGTAATGGCTCCGCCGTCTCCGCCGCTGATTGACATTACTCCTCCCCCATCGCCATTGCTGCTCCAACCTACAGCAGCGCCACCACCATTTCCTTCTCCGCCATCACCGCCGTTAGTGCTTCCAATGCCTACAGCACCACCGCTTACCTCGCCGCCGATCACTTCTCCGCCGGAGGTGGTGTCTATGCCTACAAACTCCCCGCCTCCGGTTACTCAAGTCCCGCCGGCGATTTCCTCGTCGCCGCCTCAGCCGGAAATTCCATTCGTCGCTGCTTCACCGTCGACTCCGATTACATCGAACGAGAATCCAATTCCAGCAACGCCATCTCCTCCGAATACGGCGTTGCGGACGGCAGCATCTCCTCCGGTTCCGGCGACACCGCTTCCTTCGTCTCCGCCAACTCTGATTCCGCCGTCGGTTACTTTTCCGTCAAATGCGTTACCACCATTGCCGCTGCGTCACCGGAAAGTTTCGCCGGCGCTTCCAGTTCCGACAGCCACTTCACCACCACCACAGGAATTTTGGCCTCTGGCACCGGAAGCAGCAGCAACCTCTCCGCTGCTGCCACAGCCGCCGGCGACCGTTTACCCTTTCACGGGGCCTACATTGCCATCAACTCCAGAATCAACGCCGGCGCAGCCACCATCGAGTCGAAGCTTGCCGCTTGCGGTGGACGTTGATAAACACTCAGGGTTCGAAGTGCCAAGTGGATTCATAATTGAGGGAATCGTAATTGGTGGTATCGTTATTGGGTTTGTTGTAGCACTTATGTTACTTTTGTGCAGGAATAGAAAGAAAAAGCAGCAGCAGAAGAAGAATCTGCATACACATCAATCTGAGGAATCATCACCTTGTGTTGGAGCTAAGAGTAAAAAATCAGGTTCTCATGTCATCAAAGTGCTGCCAAATCCATCAAAGCTAACAGAGGGAGGTGGAGATTTCGGCCCTGTGAATGGCATTTTCACATATGATGAGCTAGTAGCAGCCACTAAGAGTTTCTCTGAAGCCAACCTTCTTGGGGAAGGTGGATTTGGTTATGTATATAAAGGAATTCTTCCAAGTGGAAAGGAAATTGCAGTTAAACAGTTGAAATCAGGAAGCCAGCAAGGAGAGCGAGAATTTCAGGCCGAGGTTGAGACCATTAGCCGGGTGCATCACAAGCATCTTGTTGAGTTGGTTGGATACTGCGTTACCATGTCTGAAAGAATGCTTGTTTATGAATTTGTTCCAAATAACACATTGGAATTCCATTTACATGGGGAAGGGAAGCCCGTTGTACGGTGGGAGAAGAGAATTAAGATTGCCCTAGGATCTGCAAAAGGGCTCGCATATCTACATGAAGATTGTAATCCAGCAATCATTCACCGTGATATTAAAGCATCTAACATCCTTCTGGACTTCAATTTTGAAGCAAAGGTTTCTGACTTTGGCTTAGCAAAGATCTTCCCCAATGCTGATGGTTGCATCACTCACCTCACCACCCGGGTCGTGGGAACCTTTGGGTATCTGGCTCCAGAATATGCATCAAGTGGTAAACTAACAGATAAATCAGATGTATATTCCTATGGAGTGATGCTTTTAGAACTCTTAACTGGACGTCCAGCAATCAGTACAGAAGGATCAAGAAACGTGAGCTTGGTTGATTGGGCTAGGCCCTTGCTTGCGCAAGTGCTAGAAGATGGTGATGTCAGTGATCTTGTTGATCCAAGGTTGCAGAATAATTATAGAGCTGATGAGATGACTAGAATGATTACCTGCGCAGCCGCCTGCGTGCGCCATTCAGCCAGCCTTCGACCCCGTATGAGCCAAATTGCAGGTGCCTTAGAAGGATTGGTTTCTCTGTCGGATCTTGTAGGGGACATTACGCCGGGGCATACCAGAATATACAGTTGGCCAGAGAGTTCAACTTATGATGCCTGCCAATACCAACAGGACTTGAGAGACTTCAATTTGGGATTATCATCTCAACAGTGCAGCTCAAGTGTGCATAGTGAAATGACTAGTGCTTATGGTCTTTGCCTATCTGACTCAAGTAGTGAAGGCTAA 2085 0.493 MFSVAPLTPASSPVMAPPSPPLIDITPPPSPLLLQPTAAPPPFPSPPSPPLVLPMPTAPPLTSPPITSPPEVVSMPTNSPPPVTQVPPAISSSPPQPEIPFVAASPSTPITSNENPIPATPSPPNTALRTAASPPVPATPLPSSPPTLIPPSVTFPSNALPPLPLRHRKVSPALPVPTATSPPPQEFWPLAPEAAATSPLLPQPPATVYPFTGPTLPSTPESTPAQPPSSRSLPLAVDVDKHSGFEVPSGFIIEGIVIGGIVIGFVVALMLLLCRNRKKKQQQKKNLHTHQSEESSPCVGAKSKKSGSHVIKVLPNPSKLTEGGGDFGPVNGIFTYDELVAATKSFSEANLLGEGGFGYVYKGILPSGKEIAVKQLKSGSQQGEREFQAEVETISRVHHKHLVELVGYCVTMSERMLVYEFVPNNTLEFHLHGEGKPVVRWEKRIKIALGSAKGLAYLHEDCNPAIIHRDIKASNILLDFNFEAKVSDFGLAKIFPNADGCITHLTTRVVGTFGYLAPEYASSGKLTDKSDVYSYGVMLLELLTGRPAISTEGSRNVSLVDWARPLLAQVLEDGDVSDLVDPRLQNNYRADEMTRMITCAAACVRHSASLRPRMSQIAGALEGLVSLSDLVGDITPGHTRIYSWPESSTYDACQYQQDLRDFNLGLSSQQCSSSVHSEMTSAYGLCLSDSSSEG* 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g2284 694 Gene3D Transferase(Phosphotransferase) domain 1 422 630 - -
Ahy20g2284 694 Pfam Protein kinase domain 347 583 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g2284 694 Gene3D Phosphorylase Kinase; domain 1 327 421 - -
Ahy20g2284 694 MobiDBLite consensus disorder prediction 1 145 - -
Ahy20g2284 694 MobiDBLite consensus disorder prediction 212 233 - -
Ahy20g2284 694 MobiDBLite consensus disorder prediction 11 102 - -
Ahy20g2284 694 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK14 133 667 - -
Ahy20g2284 694 ProSiteProfiles Protein kinase domain profile. 346 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g2284 694 ProSitePatterns Protein kinases ATP-binding region signature. 352 374 IPR017441 GO:0005524
Ahy20g2284 694 ProSitePatterns Serine/Threonine protein kinases active-site signature. 466 478 IPR008271 GO:0004672|GO:0006468
Ahy20g2284 694 SUPERFAMILY Protein kinase-like (PK-like) 332 621 IPR011009 -
Ahy20g2284 694 CDD STKc_IRAK 352 624 - -
Ahy20g2284 694 MobiDBLite consensus disorder prediction 212 230 - -
Ahy20g2284 694 SMART serkin_6 346 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g2284 694 MobiDBLite consensus disorder prediction 283 303 - -
Ahy20g2284 694 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 133 667 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g2284 Ahy-Chr20 125265096 125270161 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g2284 204 693 Trihelix Transcription Factor Family AT4G32710 50.000 4.46e-142 431
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Ahy20g2284 Pkinase 1.10E-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g2284 - - adu:107470979 1180.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g2284 20 125265096 125270161 Ahy10g1824 10 101938241 101943351 hybridization