Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g2274 ATGGAAGGTGACAGGGAAATCATTGCTGCACCAAATGGGGTAGTTGATGGTGTTCAGAAAATTAGAGCATTGCACGGGAGGACGACTGGTCCTACAAGGCGTTCTACAAAAGGACAATGGACTGCCGAAGAGGATGAGACTTTGCGTAAAGCTGTTCAGCGTTTTAAAGGAAAGAATTGGAAAAAAATAGCTGAGTGTTTCAAGGATAGAACTGATGTCCAGTGCCTGCATAGATGGCAGAAAGTCCTAAATCCAGATCTTGTCAAAGGTCCATGGTCTAAAGAGGAAGATGAAATAATTATCGAATTAGTGAATCAATATGGGCCTAAAAAGTGGTCTACTATTGCTCAGAGTTTACCTGGACGTATTGGTAAGCAATGTCGAGAAAGGTGGCATAATCATCTTAATCCTTCAATAAACAAGGAAGCATGGACACAGGAAGAGGAGTTGGCTCTTATACGTGCTCATCAAATTTATGGAAACAAATGGGCAGAACTAACAAAGTTCTTACCTGGAAGGACAGACAATGCCATAAAAAACCACTGGAACAGTTCTGTAAAAAAGAAATTGGATTCTTACTTGGCGTCAGGCTTGATTACTCCGTTATCAAATGTACCACTTGTTGGAAATCCCAATCAACCCATGGCCTCAACCTCTTCAAAGTTGCAGTCTAGTGGAGATGAAGCTGGTCATAGGGGGACTGAAGGAGAGGAAGTTTCACAATGTAGCCAGGAGTCAGCTAATGCCACACAGTTTCCATCTGCCAAAGAGATGAGCAATGTTTTACAATCCAGAGAGGAATACAGAGGAAACGAAGAATATGGTCCTGGAAAGGGGTATAGTCCTAGCCAAGCTTCTTGTTCAGAGCCATATTATGTTTCTCTGGACGACATCACTATATCTATCCCAGAGATGCCTCGCCAAGTGACTTCCTCCTCTCAATTCATTGAGCAAAATTACTCACAAGAACCTGTAAATCCAGCAGCCGGGGATTGCCATCATAATTTGCTTTCCTTACCCAATATTTCCTCACTGGGTTTTGTGCAGGAATCCACACAGTTGCAAAATGAGTGTATGGTTCATGCTCGCTGTGAAGGCCATGATATGGCCGATGCTCCATTTCAGACTTCTGTAGAGCTAGCTGTTTCAACATCCATAAGACCTACTGCTATGGACTCGCTACGAGAGCACATGTTGATATCTGATGATGAATGTTGCAGAGTTTTATTTTCAGAGGCAATAAGTGATGACGGCCCTTCTTCTGTGGACTATAATAAAGGTGTACATATGGTTGACTTGTCTGGGTGCACTTCCATTCTTCACGAGTCGTCTTTACCATCTGCCTCAGTACCTACTGCTAATGATGGTAGATTGCAGTGTACTTCAGAAACAAAACATTTACTTCAGCCTGAGGATCAGCAGTTTGTCTCCAGAGCACATGATGTTTATGCTAATGACTTAGCCAGTGCTCCTTCTATTTATGGTATATGTAGTGCTGAAATGCAAGAGGAATCTGATATAGTGAATGACACTTCAAAATTGATCCCTGTAAATAGTTTTGGCTGTGGACCAGATACTAAAAAAACTGACCATTCTATCATGGAAAAGCTGAATGGGCATGCAGAACAGGAAGACACAGGAGCTTTATGTTATGAACCTCCCCGTTTTCCTAGTTCGGATATTCCTTTCTTCAGCTGTGATCTTGTACAATCTGGCAGTGATATGCAGCAAGAATTTAGTCCCCTTGGTATTCGCCAGTTTATGATGTCCTCTATGAACTGTCTGACTCCCTTTAGGTTATGGGACTCACCTTCTCATGATAAAAGCCCGGATGCTTTGTTGAAAAGTGCTGCTAAAACCTTCACAGGTACACCATCAATATTAAAGAAAAGACACCGTGATTTTTTGTCTCCTCTATCAGATAAGAGAGTTGACAAGAAACTTGAGACATCCAACTTGATAAAAAACTTTTCCCGACTGGATGTCATGTTTGATGACAGTGAGACACAGAAAGCAGATCCACTTTCTCCATCTCCATTGAAGGAAAGTCTTGGGCCATCTTCTGAAATGGAACAAGTAGACAAGAAAAATGAACCACCAATGCTGGACGACAATAAATCAGTAAATGATAAGGATGCTAGTGATTTTCTGGATAAGACTGAGCAACGAGCTCTCGATGTTGATTCTAAGAGGAATGATGATGTTAACACTACCGTTGAGATTGTGCAACAACGTTCTGGAGTCTTGGTTGACCGTGATCCGAATAACTTGCTGTTGAATTCTCCTAATCAAGTTGGTGTGAAATCAGACATAGTATTAAGTGCTAGAACAAATAAACATGCATGCTCAAGTGTTAAGTCTCCTTGTATTCGTGTAAAGGAGAATGAGAGAGTTTCAATTGCTCTTACATGTGTACAATCTGTTTGTTCAACAGCCGCGGTAGAAAATTTGGGTGATCAAACAGGAAAAGATGGAGGCTTTGAAACATCCAGCATATTTAATGAAACACCTTTTAGGAGAAGCCTTGAATCACCTTCACCGTGGAAATCTCCTTGGTTCATAAATACATTTCTGTCTAGTCCCAGGATTGATACCGAAATTACAATTGAGGATTTTGGGATATTCATGAGCCCATGTGATAGAAGCTATGATGCAATTGGGTTGATGAAACAGGTTAGCGAACAAACTGCTGCTCAATATGCCAATGCTCATGAGATTTTGGAAAATGAAACTCCTAAGGCGTTACCAAAAGATGCATCTGGAAACAACAGGGATGAGAACAAGGAAAATAATGATCCACAGAAGCAGCATGTGAACCATTCTCAATTGACTTCAAAAGCTTTGGTGGAGCGACGCATACTTGACTTCAGTGAATGCGGATCACCAGGCAAGGGTGACAGCAGCAAATCATCAAGCATGATCTTAGAAAGTCCGTCGTCATATTTGAAGGATTGTAGATAG 2961 0.414 MEGDREIIAAPNGVVDGVQKIRALHGRTTGPTRRSTKGQWTAEEDETLRKAVQRFKGKNWKKIAECFKDRTDVQCLHRWQKVLNPDLVKGPWSKEEDEIIIELVNQYGPKKWSTIAQSLPGRIGKQCRERWHNHLNPSINKEAWTQEEELALIRAHQIYGNKWAELTKFLPGRTDNAIKNHWNSSVKKKLDSYLASGLITPLSNVPLVGNPNQPMASTSSKLQSSGDEAGHRGTEGEEVSQCSQESANATQFPSAKEMSNVLQSREEYRGNEEYGPGKGYSPSQASCSEPYYVSLDDITISIPEMPRQVTSSSQFIEQNYSQEPVNPAAGDCHHNLLSLPNISSLGFVQESTQLQNECMVHARCEGHDMADAPFQTSVELAVSTSIRPTAMDSLREHMLISDDECCRVLFSEAISDDGPSSVDYNKGVHMVDLSGCTSILHESSLPSASVPTANDGRLQCTSETKHLLQPEDQQFVSRAHDVYANDLASAPSIYGICSAEMQEESDIVNDTSKLIPVNSFGCGPDTKKTDHSIMEKLNGHAEQEDTGALCYEPPRFPSSDIPFFSCDLVQSGSDMQQEFSPLGIRQFMMSSMNCLTPFRLWDSPSHDKSPDALLKSAAKTFTGTPSILKKRHRDFLSPLSDKRVDKKLETSNLIKNFSRLDVMFDDSETQKADPLSPSPLKESLGPSSEMEQVDKKNEPPMLDDNKSVNDKDASDFLDKTEQRALDVDSKRNDDVNTTVEIVQQRSGVLVDRDPNNLLLNSPNQVGVKSDIVLSARTNKHACSSVKSPCIRVKENERVSIALTCVQSVCSTAAVENLGDQTGKDGGFETSSIFNETPFRRSLESPSPWKSPWFINTFLSSPRIDTEITIEDFGIFMSPCDRSYDAIGLMKQVSEQTAAQYANAHEILENETPKALPKDASGNNRDENKENNDPQKQHVNHSQLTSKALVERRILDFSECGSPGKGDSSKSSSMILESPSSYLKDCR* 987
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g2274 986 MobiDBLite consensus disorder prediction 963 978 - -
Ahy20g2274 986 SUPERFAMILY Homeodomain-like 38 93 IPR009057 -
Ahy20g2274 986 Gene3D - 89 140 - -
Ahy20g2274 986 PANTHER MYB PROTEIN-RELATED 7 985 - -
Ahy20g2274 986 SMART sant 88 137 IPR001005 -
Ahy20g2274 986 SMART sant 36 85 IPR001005 -
Ahy20g2274 986 SMART sant 140 188 IPR001005 -
Ahy20g2274 986 PANTHER TRANSCRIPTION REPRESSOR MYB5 7 985 - -
Ahy20g2274 986 ProSiteProfiles Myb-like domain profile. 136 186 IPR001005 -
Ahy20g2274 986 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 140 190 IPR017930 -
Ahy20g2274 986 MobiDBLite consensus disorder prediction 204 263 - -
Ahy20g2274 986 ProSiteProfiles Myb-like domain profile. 32 83 IPR001005 -
Ahy20g2274 986 CDD SANT 143 183 IPR001005 -
Ahy20g2274 986 Gene3D - 36 88 - -
Ahy20g2274 986 MobiDBLite consensus disorder prediction 237 261 - -
Ahy20g2274 986 SUPERFAMILY Homeodomain-like 86 182 IPR009057 -
Ahy20g2274 986 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 84 139 IPR017930 -
Ahy20g2274 986 MobiDBLite consensus disorder prediction 204 227 - -
Ahy20g2274 986 Coils Coil 890 910 - -
Ahy20g2274 986 MobiDBLite consensus disorder prediction 688 717 - -
Ahy20g2274 986 Pfam Myb-like DNA-binding domain 37 83 IPR001005 -
Ahy20g2274 986 Gene3D - 142 199 - -
Ahy20g2274 986 Pfam Myb-like DNA-binding domain 92 150 - -
Ahy20g2274 986 CDD SANT 40 83 IPR001005 -
Ahy20g2274 986 ProSiteProfiles Myb-like domain profile. 84 135 IPR001005 -
Ahy20g2274 986 MobiDBLite consensus disorder prediction 919 935 - -
Ahy20g2274 986 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 32 83 IPR017930 -
Ahy20g2274 986 MobiDBLite consensus disorder prediction 671 685 - -
Ahy20g2274 986 MobiDBLite consensus disorder prediction 957 986 - -
Ahy20g2274 986 MobiDBLite consensus disorder prediction 668 717 - -
Ahy20g2274 986 CDD SANT 91 135 IPR001005 -
Ahy20g2274 986 MobiDBLite consensus disorder prediction 907 944 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g2274 Ahy-Chr20 124975595 124981627 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g2274 8 986 MYB Transcription Factor Family AT4G32730 44.132 0.0 724
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Ahy20g2274 Myb_DNA-bind_6 5.00E-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g2274 - K09420 gmx:100811335 1335.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g2274 20 124975595 124981627 Ahy20g2274 20 124975595 124981627 ECH
Ahy20g2274 20 124975595 124981627 Ahy10g1810 10 101520098 101526089 hybridization
Ahy16g2848 16 142319519 142325167 Ahy20g2274 20 124975595 124981627 PCT
Ahy20g2274 20 124975595 124981627 Ahy16g2848 16 142319519 142325167 PCT