Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g2266 ATGGAGCAGAGCGAAACGGCTTTGGATCTAGCTCCGAAATTGGTGAGGCAGTTGGATTTCACAGCACACCTGAAACTGGCGCCGACTCCGCCGCCGCAGTCGCTGGCAGAGGCGATTCCGCGAACGCCATCACGATCACCGTTGCAATTGCAATTGACTCTGCATCCGCTAGGGCAACAGCAACAACAGCAGCAACAACCGCAGCCGTGGTTGTTTTCGCAGGGACAGCAGCTGAGAGTGCCGCCGCAGTCGCCAGCGGTGCGGCAGCAAAAGCTTTCGCCGGTTCCTCGAATTCCGTACACTGTCCAGAAGCTTCCGGTAAAGGCGTTCAAAGTGTCGAAGCAGGAGTCTCCCAGTCCCAGATCACAACCTTGGTATAATGTTGAATTAAAAGACAGCACTCCAAAGAAATCAAAACAATGTAACTGCAAAAATTCTCGATGCCTCAAATTGTACTGTGAATGCTTTGCATCTGGGATGTATTGTGATGGTTGCAATTGTACAAATTGTCAAAACAATGTGGATAATGAGGCAGCTAGACAGGAGGCTGTTGGACTTACATTAGAGCGCAATCCAAATGCTTTCAGACCAAAAATTGCTAGCAGTCCACAAGAAACTCGAGATTCCAAGGAAGATGTGTCTGAAATTCAATTAGTTGGAAAGCACAATAAAGGATGTCACTGTAAAAAATCAGGTTGCCTTAAGAAGTATTGTGAGTGCTTCCAAGCCAATATCCTCTGCTCTGAAAATTGCAAATGCATGGACTGCAAGAATTTTGAAGGAAGTAATGAAAGAAGAGCAAGTTTTCATGAAGAGTGTAATATGTTTCGCATCAAACAGGAAGCAAATGCTGCCATCAGTGGAGCAGTTGGTTTCTCTGGCTACGGGACTGGAATTGCCATAACACCCAAGAAAAGAAAAATTCAGGAAATATTTTCTAGCAAATCGTCAATAGATAAAACTGTTTGCCAAACAACTCAATATCAACAGGAAACTGATCCTATAGTTACACCACCGACATCTCAGTCAACTTTCTTTTATGTTGACACTGCCAACACTAGAAATTCAGGTTATTCAAGATCTACATACAGGTCACCATTGGCGGATGTCCTCCAGCCACAAAATGTGAAGAATCTCTGTTCACTTTTTGTTGTTCTCTCAGGAGTAGCTGCCAAGACAAATGCAGAAATGAGAGCCAAAGTAGGCCAGAACGTTGATGCTGGGAAATTTAAATCTTCTATTCCTTCATCAACTCAGTTGCTGCAAGACAGGGAAGATGTCTGCAAGTTTGTATGTGATAATTGTAAAGATGAAGTAGATAGAGTTGATATTGACTGTTATAATAGGCCACTTTCACCAGAAACCCTATCACTGATGTGTGATGAACAAGATGAGGTGTTTTTCGATAATGGTTCTGCAAATAGAGTGGCATGCAACAATTTTCAAAGCATTGTTCAAAATTCATCTACTTCTGATCGATGCCCTGATGTGTATGAGGAGCAAGAAAGGGTTGTACTCACAAAGTTCTGGGATGTTCTACGCGGACTCATTACTGTTGGAAGCATAAAAGAAACAATGTGCTCTTCATTAGCCAAGAAAGACGGGGGAAGCGAGGAAGAACTTGCAGCCAACAGTAATGGTGCTGAAGTTGATATAGGGAGTGAAAAGAAGGAAACTCCCAGCAACTGTGTTGCAAGGTGCCCCATCTCATCATCGGCCATTGAAATATCTCAGAAAAAGCATGCAATGATCGATGGCAATGGTGATCTTGATCTCTCGTTAAGGTTTGCTTGCCAATTTTATGGAAGGGAATGA 1815 0.4342 MEQSETALDLAPKLVRQLDFTAHLKLAPTPPPQSLAEAIPRTPSRSPLQLQLTLHPLGQQQQQQQQPQPWLFSQGQQLRVPPQSPAVRQQKLSPVPRIPYTVQKLPVKAFKVSKQESPSPRSQPWYNVELKDSTPKKSKQCNCKNSRCLKLYCECFASGMYCDGCNCTNCQNNVDNEAARQEAVGLTLERNPNAFRPKIASSPQETRDSKEDVSEIQLVGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEGSNERRASFHEECNMFRIKQEANAAISGAVGFSGYGTGIAITPKKRKIQEIFSSKSSIDKTVCQTTQYQQETDPIVTPPTSQSTFFYVDTANTRNSGYSRSTYRSPLADVLQPQNVKNLCSLFVVLSGVAAKTNAEMRAKVGQNVDAGKFKSSIPSSTQLLQDREDVCKFVCDNCKDEVDRVDIDCYNRPLSPETLSLMCDEQDEVFFDNGSANRVACNNFQSIVQNSSTSDRCPDVYEEQERVVLTKFWDVLRGLITVGSIKETMCSSLAKKDGGSEEELAANSNGAEVDIGSEKKETPSNCVARCPISSSAIEISQKKHAMIDGNGDLDLSLRFACQFYGRE* 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g2266 604 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 139 173 IPR005172 -
Ahy20g2266 604 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 224 258 IPR005172 -
Ahy20g2266 604 PANTHER TESMIN/TSO1-RELATED 1 572 IPR028307 -
Ahy20g2266 604 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 5 ISOFORM X1 1 572 - -
Ahy20g2266 604 MobiDBLite consensus disorder prediction 25 44 - -
Ahy20g2266 604 ProSiteProfiles CRC domain profile. 137 261 IPR005172 -
Ahy20g2266 604 SMART CXC_2 221 262 IPR033467 -
Ahy20g2266 604 SMART CXC_2 136 176 IPR033467 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g2266 Ahy-Chr20 124722738 124727967 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g2266 116 532 CPP Transcription Factor Family AT4G29000 50.917 5.99e-128 387
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Ahy20g2266 TCR 3.20E-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g2266 - K21776 gmx:100811459 696.041
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g2266 20 124722738 124727967 Ahy20g2266 20 124722738 124727967 ECH
Ahy20g2266 20 124722738 124727967 Ahy10g1802 10 101127025 101132599 hybridization