Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g2232 ATGCATGATGCATGGTGGATAGAGCTGTTTGGTTTAGGTAGTCGGGAAGAAGAGAACAAGGCAACCAGCTTCATTAGCAATTTGCAGCATTGCCAAATGGCAATGGCAATGGCCATGGCCTCATCCTCAATGTTATCAACAACTTGTTCTTTCAGTTTCCCTTCTATCACTATGTGCATTTCCTCTTACAACCCTAACCGTTCTAGAAGACTAGCTCTCTTTCACCTTCTTTCTGGTCCTTTTGCTATTCCACAGTCCCAATCTCTGTTATTTGGTGTAAAAGGTTCAGAATTGTTTAGAGTAGGAGAGGCTAATGCAGCAGAGAATCTAATTCAACCAGAGCAAAACTTGTTTGAATGGGTCAAAAATGACAATAGAAGATTCTTACATGTTGTGTACCGTGTTGGGGACTTGGATAAGACTATAAAGTTTTACACGGAGTGCCTTGGCATGAACCTGTTGAGAAAACGTGATATACCTGAAGAAAGATACACAAATGCTTTTCTTGGATATGGCCCTGAAGATTCCAATTTTACAGTTGAGCTTACCTACAATTATGGAGTGGACAAGTATGACATTGGAAATGGGTTTGGTCATTTGGGTGTTGTAGTTGAAGATGCTGCCAAGGCAGTTGATCTGATAAAAGCAAAAGGTGGAAAGGTTATCAAGGAACCAGGGCCTGTCAAAGGTGGCAGCACAGTAACTTCTTTCATCCAAGATCCTGATGGTTATGAATTTGAGCTCTTGGAAAGAGGACTTACTTCCGAACCCCTATGCCAAGTGTCACTTCGTGTAGGTGATCTTGACCGTGCCATAGTCTTCTATCAGAAAGCTCTTGGCATGCAACTTCTGCATAGGAAAGACAATCCTGAGCACAAGAATACAGTTGCCACAATGGGGTATGGTCCTGAAGATAAGAACACTGTTCTAGAACTTACATATAACTATGGAATCACTAATTATGACAAAGGAAATGGCTATGGACAGATTGCAATAGGCACAAATGATGTGTATAAGAGTGCAGAAGCAATCAAACTGTGTGGAGGCAAGATTATCCGTGAACCTGGGCCGCTGCCAGGTATCAACACCAAGATAGCAGTTTGCTTGGACCCTGATGGTTGGAAATTGGCTTTTGTTGATAATGCTGATTTCCTGAAGGAATTAGAGTGA 1170 0.4188 MHDAWWIELFGLGSREEENKATSFISNLQHCQMAMAMAMASSSMLSTTCSFSFPSITMCISSYNPNRSRRLALFHLLSGPFAIPQSQSLLFGVKGSELFRVGEANAAENLIQPEQNLFEWVKNDNRRFLHVVYRVGDLDKTIKFYTECLGMNLLRKRDIPEERYTNAFLGYGPEDSNFTVELTYNYGVDKYDIGNGFGHLGVVVEDAAKAVDLIKAKGGKVIKEPGPVKGGSTVTSFIQDPDGYEFELLERGLTSEPLCQVSLRVGDLDRAIVFYQKALGMQLLHRKDNPEHKNTVATMGYGPEDKNTVLELTYNYGITNYDKGNGYGQIAIGTNDVYKSAEAIKLCGGKIIREPGPLPGINTKIAVCLDPDGWKLAFVDNADFLKELE* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g2232 389 CDD GlxI_Ni 129 249 - -
Ahy20g2232 389 PANTHER LACTOYLGLUTATHIONE LYASE 44 389 - -
Ahy20g2232 389 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 257 381 IPR037523 -
Ahy20g2232 389 Gene3D - 254 389 IPR029068 -
Ahy20g2232 389 TIGRFAM glyox_I: lactoylglutathione lyase 116 260 IPR004361 GO:0004462|GO:0046872
Ahy20g2232 389 TIGRFAM glyox_I: lactoylglutathione lyase 258 383 IPR004361 GO:0004462|GO:0046872
Ahy20g2232 389 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 260 378 IPR004360 -
Ahy20g2232 389 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 128 248 IPR004360 -
Ahy20g2232 389 ProSitePatterns Glyoxalase I signature 1. 260 281 IPR018146 GO:0004462|GO:0046872
Ahy20g2232 389 PANTHER LACTOYLGLUTATHIONE LYASE 44 389 - -
Ahy20g2232 389 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 126 251 IPR029068 -
Ahy20g2232 389 ProSitePatterns Glyoxalase I signature 1. 130 151 IPR018146 GO:0004462|GO:0046872
Ahy20g2232 389 Gene3D - 101 252 IPR029068 -
Ahy20g2232 389 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 258 381 IPR029068 -
Ahy20g2232 389 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 127 251 IPR037523 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g2232 Ahy-Chr20 123838882 123841539 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g2232 260 380 Calmodulin-binding Proteins AT1G08110 28.082 1.45e-09 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g2232 K01759 - gmx:100810908 546.969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g2232 20 123838882 123841539 Ahy20g2232 20 123838882 123841539 ECH
Ahy20g2232 20 123838882 123841539 Ahy10g1785 10 100614417 100617064 hybridization