Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g2202 ATGGTTGATTTGATTGGAGAGTCATTGCATATCCAGAATGTTTTAGCTGAGGAAATGGACGAATTGTTAGTTGATAGTGATGACAATGATGTTGAAGACCTGTTATTGAATAGTATAGGAAGTATCGGTCGGGTTAATTTCGTAGGTTTGAGCGTTGATGCTACTAAGAAGTATGTATTTTCAAACCTTGATGTTGCCTATGCCTTTTACAATGCATTTGGGAGGGTCAATGGATTTTCAATTAGGAAGTTCAAGGCTGGGCACAGTGAGATTGATAAGAGCATACTCTGGCAAACATTTGTGTGTTCGAGACAAGGATATCGTATTTTCAGAGGGGTCGATGAAACAAATAGGAAGAGAGCTCTAAAGCCAAAGACTAGGTGTGGGTGTGTAGCATAA 399 0.3935 MVDLIGESLHIQNVLAEEMDELLVDSDDNDVEDLLLNSIGSIGRVNFVGLSVDATKKYVFSNLDVAYAFYNAFGRVNGFSIRKFKAGHSEIDKSILWQTFVCSRQGYRIFRGVDETNRKRALKPKTRCGCVA* 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g2202 132 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 47 132 - -
Ahy20g2202 132 Pfam FAR1 DNA-binding domain 69 132 IPR004330 -
Ahy20g2202 132 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 47 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g2202 Ahy-Chr20 122578412 122578917 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy20g2202 FAR1 6.90E-11 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g2202 - - aip:107623722 238.424