Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g2198 ATGAATCAGACAGATGTGCCCAAGGTTGGCATGTGTTTTGGAACCATTGAAGATGCAAATCAATTTTATCAGAATTATGCCAAGCGCATTGGTTTTGTTACTAAGATAAGGTTTACCCGAAGAGTTGGTAAAGATAAGGTTCCTAAGAATCAAATGATCACTTGCAATAGGGAGGGGAAACGCAAGTCTAGAGTTTCACCAATAGAAAAGACCAACCCTAGAAACAACTACAATTGCCCCGCAAGGATTTCTATTAGGTTGAATAAGGAGGGTCTTTGGATTATATCGAAGGTGTGTTTGGATCATTCACATCCTTGTGATCCAGAGATGGCAAAACTGTTGACACATAATAGAGAGATGACTATGCACATGTGTCGAGTCATTGAGAGGAATGATGAAGCAGGTGTGAGACCAAGCAAAACATATCAAGTATTGGTGGGTGCAGCGGGGGGTTTTTCTAAGATAAACTTAATGGAAAAAGATGTTAGGAACTATCTCAGCAGAAAGGTACGCAATGTTACGGAAGAAATGGATGCTAGGGAGATGTTGAAGTATTTTACACGGATGAAGGATATGAACTCTTATTTTTATTTTGATGTTGAACTTGATCAAAACAAGCGTCTCAAAACTATATTTTGGGCTGATGCTCGAAGTAGAGCAGCATATGAGTACTTCGGTGATGTAGTTTCGTTTGATACTACTTATAAAACCAATTGTTACGATATGCCATTTGGTTCCTTTGTGGGGGTTAATCACCATGGTAACTCGGTGCTTCTTGGGTGTGGTTTGTTGACTAAGGAAAATTCAGGCTCGTTTACTTGGTTATTTAATGTTTGGCTTACATGTATGCATGGAAAGGCTCCTAAAGGCATTATAACAGACCAATGCCTCGGAATACAAGCTGAAATTGAGAATGTGATGCCAGAGACACGTCATAGGTTATGCATTTGGCACATTACGAAAAAGATTTCAGAAAAATTCAAAAGACACAAGAGATATGAAGAGTTACAAAGTGATTTAAATAATATTGTTTGGGAGTCTATTTCAGAAGATGATTTTCAAAATCAATGGGAAGATTTTCTGATTGAATATGGTCTAGAAGATAACAAGTGGCTATCAGATATCTATGAAGAAAGACATCGATGGGTTCCAATTTTTCTTAACAACTTTTTTTGGGCTGGTATGAGATCCACACAACGAAGTGAGAGTATGCATTCATATTTTGACAAATTTATAAATAACAAGAGCTTGTTGATTCAATTTGTCAAACAATATGACAATTGTCTTGGATGGAAAGAGCAACAAGAAAGGGAGACTGATGTTGAAGACTATAAATCAATAATACCTTGTGCCACTAATTCCTTAATAGAGAAGCAATTTCAAGGTGCATATACTAATGCAAAGTTTAAGGAAGTACAAAAGCAATTTAGAAAGAAAGCAAATTGTATTTTGCACCTTATGAAAGTAGTTTCTACATCTAAAGTCTATTCTATTTTGGAGGATGTATCTACTTCTAAAGAGAGGGTTTATGAAGTTAACTACAATGCGGAAACGAAGGATATTACATGCATGTGTCAAATGTTTGAATCAAGAGGCATATTATGCCGTCATAGCTTGGTTGTCCTAGGGCATGAACGCGTGAGAGAAATTCCAAGAAGATATATTTTGGACCGTTGGAGCAAACTTGTGAAGCGAAGACACAGTGATATTAAGAGCAGCCATGATCCAAGTTTGTTGGATCCAAAAACAAAGAGGTTTGATGATTTATGCTCCCATTCAAACAGTGTTGCTCAATTTGCATCCCAAACAAAGGAAACAAGTGATATCTTACATCGTTATCTTGATATGGCTATGGCGGAGTGCCAAAAGCATGTTGCTAACTCATCATCTAATGCCAATGAGTTAGATAATTTGCTTACATTAGAAGATGGTGGTAAAGATGCACTGTCCATTTTTGTAGGAGGCTGTATAATAAGCATTCAAGATATTAAAAGCCCTCCTTATGTGTCCACTAAGGGTCGTCCAACAAATAGGCTAGGATCTGAAAAAGACAAGATGATAAAAAAGAAGACCGAGGCAAAGAAGAGAAAAAGTGAGATAACCGAAAAAGAGGATAATCAACATATTGGAGATAGTCAAAGTCTCCCTTTCAACGAACAGGTTCATCCAATACTTCAAGATGCTAACTACAATGTTAATGAGGGATTTGAATCTGATTCAATGGGAGGATCAATGGGAGGATTCATGTCCTTATTGAACTCAATCCATTCATACCAATTCTCAAATGTCGATTGA 2295 0.3704 MNQTDVPKVGMCFGTIEDANQFYQNYAKRIGFVTKIRFTRRVGKDKVPKNQMITCNREGKRKSRVSPIEKTNPRNNYNCPARISIRLNKEGLWIISKVCLDHSHPCDPEMAKLLTHNREMTMHMCRVIERNDEAGVRPSKTYQVLVGAAGGFSKINLMEKDVRNYLSRKVRNVTEEMDAREMLKYFTRMKDMNSYFYFDVELDQNKRLKTIFWADARSRAAYEYFGDVVSFDTTYKTNCYDMPFGSFVGVNHHGNSVLLGCGLLTKENSGSFTWLFNVWLTCMHGKAPKGIITDQCLGIQAEIENVMPETRHRLCIWHITKKISEKFKRHKRYEELQSDLNNIVWESISEDDFQNQWEDFLIEYGLEDNKWLSDIYEERHRWVPIFLNNFFWAGMRSTQRSESMHSYFDKFINNKSLLIQFVKQYDNCLGWKEQQERETDVEDYKSIIPCATNSLIEKQFQGAYTNAKFKEVQKQFRKKANCILHLMKVVSTSKVYSILEDVSTSKERVYEVNYNAETKDITCMCQMFESRGILCRHSLVVLGHERVREIPRRYILDRWSKLVKRRHSDIKSSHDPSLLDPKTKRFDDLCSHSNSVAQFASQTKETSDILHRYLDMAMAECQKHVANSSSNANELDNLLTLEDGGKDALSIFVGGCIISIQDIKSPPYVSTKGRPTNRLGSEKDKMIKKKTEAKKRKSEITEKEDNQHIGDSQSLPFNEQVHPILQDANYNVNEGFESDSMGGSMGGFMSLLNSIHSYQFSNVD* 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g2198 764 MobiDBLite consensus disorder prediction 687 715 - -
Ahy20g2198 764 MobiDBLite consensus disorder prediction 687 709 - -
Ahy20g2198 764 Pfam MULE transposase domain 228 322 IPR018289 -
Ahy20g2198 764 Pfam FAR1 DNA-binding domain 21 107 IPR004330 -
Ahy20g2198 764 Coils Coil 683 703 - -
Ahy20g2198 764 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 4 630 IPR031052 GO:0006355
Ahy20g2198 764 ProSitePatterns Transposases, Mutator family, signature. 294 318 IPR001207 GO:0003677|GO:0004803|GO:0006313
Ahy20g2198 764 ProSiteProfiles Zinc finger SWIM-type profile. 510 546 IPR007527 GO:0008270
Ahy20g2198 764 SMART 26again6 521 548 IPR006564 GO:0008270
Ahy20g2198 764 Pfam SWIM zinc finger 510 543 IPR007527 GO:0008270
Ahy20g2198 764 PANTHER OS03G0843700 PROTEIN 4 630 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g2198 Ahy-Chr20 122335741 122338649 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy20g2198 MULE 3.10E-30 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g2198 - - ahf:112717726 1470.29