Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g2188 ATGTGTGAAGATGGAGTTGGTGATACGGCCGCATTTGATTATGGGGATGTTGTGGAACTAACGGAGGATGATATTTTGAGGAAGGTTTTTCGCAGCGAAAATGATGCATACAAGTTTTATAAGAAATTAGGAAAATTTTACGGATTTGGTATTAGAAAGGGAGACATGTTCAAGGATGAGGAGGGTAATTTGGTTCGGAGAAGATTTTTTTGCAATAGAGAGGGACAGAGAGATAAGAAACATTATAACAGGGTCGATAGGAAGAGGCCTCACAAGCCGGAGACAAGGACGAATTGTGAAGCGAGGGTGTGTGTGTATCTAGATAAGGAAAGGTCGTTGTGGAGGGTCAAGAAAGTCATTTTGAACCACAACCATGAGATGACGCATCACAGAATGGTTCATCTAATTCCAAGTTTTCATTACATGACGGATGCTGCAAAAGCCCAAATAGAGGGATTTCAAGGATGTGGCATCTTAACATCGAAGACAATGCGGTATATGGCTGGCATATCTAGAGAGTATTCACTTGTAGGGTTTCTGAAGAAGGATGCTTACAACTACGTCGATAAGAGACATCGTGCAAGGATAACTGATGGAGACGCGAACGCAGCCATAGTGTACTTGGAGGGTAAAGTTGATGCAGACCCGACTTCGATGGCAAGGTATAATGTGACGAAGAACGAAATGCTAGCCAATTTATTTTGGGCGGATGGTGGCAACAGGATAGATTACCAATATTTTGGAGACGTACTGGCATTCGACTCAACTTACAGGAAAAACAAATACAAGAGGCCACTGGTGATTTTCTCAGGGTGCAATAACCACAAGCAAACGTGTATTTTTGGGTTTGGTTTGGTCTTAGATGAGAGTATTGCTTCATATAAATGGCTTTTCGAGAATTTCTTGGAGGTCATGTGTAACAGACAGCCGTTTGTTGTTCTTACGGATGGCGATGACTTAATTTGA 966 0.4193 MCEDGVGDTAAFDYGDVVELTEDDILRKVFRSENDAYKFYKKLGKFYGFGIRKGDMFKDEEGNLVRRRFFCNREGQRDKKHYNRVDRKRPHKPETRTNCEARVCVYLDKERSLWRVKKVILNHNHEMTHHRMVHLIPSFHYMTDAAKAQIEGFQGCGILTSKTMRYMAGISREYSLVGFLKKDAYNYVDKRHRARITDGDANAAIVYLEGKVDADPTSMARYNVTKNEMLANLFWADGGNRIDYQYFGDVLAFDSTYRKNKYKRPLVIFSGCNNHKQTCIFGFGLVLDESIASYKWLFENFLEVMCNRQPFVVLTDGDDLI* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g2188 321 Pfam FAR1 DNA-binding domain 38 128 IPR004330 -
Ahy20g2188 321 PANTHER OS02G0262500 PROTEIN 24 318 - -
Ahy20g2188 321 Pfam MULE transposase domain 250 319 IPR018289 -
Ahy20g2188 321 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 24 318 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g2188 Ahy-Chr20 121336215 121337180 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy20g2188 FAR1 1.10E-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g2188 - - aip:107620865 660.988