Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g2173 ATGAGAGATTCTCCTCCCACAAGCTCGCGAGAGCTAGGGTTTCTGAGGAAGGGATCGTTGAAACAATTCATAATGATGATGATGATGAAGCGCCCGATGCTGCGGAGAATGGAGTTGCGGGAGCAAGATGACTACGAGGTTGTGAGGAAGGTGGGAAGAGGGAAATACAGTGAGGTCTTTAAGGGCGTTCACTCCACCGATAATGAAAAATGCATAATCAAGATCCTCAAACTCGTCAAGAAGAAAAAGTTAAAGAGGGAGATCAAAATATTACATAATCTTTGTGGAAGTCCCAATGTTATAAAGCTGCTTGACATTGTTAGGGACCAGCAATCAAAGACCCCAAGCCTTATATTTGAATATGTCAATAACACTGATTTTAAAGTGCTCTACCCCACCCTGTCAGATTATGATATTCGATATTATATCTATGAACTTCTAAAGGAAAGGGTCAAAGTTCCCTTCAAATCTGAAGGGAAGGGAAACTTCAGAACAGTGAGCTTCAAGTTCAAAGCAGTTGCACCAAGAACAAGACTCATATTCTACAGCTCCTTTTACCATACCAGAATTGATGATTATGGATCTCTCTGTGGCCCTGTTCTTGACCAGAGTTAG 615 0.4163 MRDSPPTSSRELGFLRKGSLKQFIMMMMMKRPMLRRMELREQDDYEVVRKVGRGKYSEVFKGVHSTDNEKCIIKILKLVKKKKLKREIKILHNLCGSPNVIKLLDIVRDQQSKTPSLIFEYVNNTDFKVLYPTLSDYDIRYYIYELLKERVKVPFKSEGKGNFRTVSFKFKAVAPRTRLIFYSSFYHTRIDDYGSLCGPVLDQS* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g2173 204 PANTHER CASEIN KINASE II SUBUNIT ALPHA 39 149 IPR045216 GO:0004674|GO:0006468
Ahy20g2173 204 SUPERFAMILY Protein kinase-like (PK-like) 25 147 IPR011009 -
Ahy20g2173 204 ProSitePatterns Protein kinases ATP-binding region signature. 51 81 IPR017441 GO:0005524
Ahy20g2173 204 PANTHER CASEIN KINASE II SUBUNIT ALPHA-2 39 149 - -
Ahy20g2173 204 Pfam Protein kinase domain 45 148 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g2173 204 SMART serkin_6 45 201 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g2173 204 Gene3D Phosphorylase Kinase; domain 1 34 121 - -
Ahy20g2173 204 ProSiteProfiles Protein kinase domain profile. 45 204 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g2173 Ahy-Chr20 120618620 120624181 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g2173 40 204 Receptor kinase-like Gene Family AT1G16160 24.706 5.90e-07 47.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CK2 Ahy20g2173 Pkinase 2.90E-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g2173 K03097 - zju:107409035 182.57