Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g2159 ATGAACTCTCTTGTGGGATTTGGTTCTATAGCTGCTTTTATCATCAGTTCGATATCACTACTGAACCCCGGGTTGGCCTGGGATGCAACATTCTTTGATGAGCCGGTCATGCTTCTTGGTTTTGTGCTTCTTGGACGTTCTTTGGAGGAAAAGGCAAGGATTCAGGCATCTAGTGATATGAATGAACTCCTTTCATTGATATCTACTCAGTCAAGACTTGTGGTTACTTCATCGGAAGGTTCACCATCTACAGAGAGTGTGCTCGGTTCTAACACAATTTGCGTTGAAGTCCCAACTGATGATATCCGAGTAGGTGACTCAGTGTTGGTGTTGCCTGGAGAGACTATTCCTATAGATGGAAAGGTCATTTCAGGAAGAAGTGTTGTGGATGAATCCATGCTTACTGGAGAATCACTTCCTGTATTTAAGGAGGAAGGCCTCACAGTTTCTGCAGGAACTATAAATTGGGATGGACCTTTAAGGATTGAAGCTTCTTCATCTGGCTCCAACACAATGATATCCAAGATTGTACGCATGGTTGAGGATGCCCAGTCACGTGAAGCACCTGTACAGAGGCTTGCTGATTCCATAGCAGGGCCATTTGTATACAGCGTAATGACTATGTCAGCAGCAACATTTGCATTTTGGTACTATATTGGATCAAACATATTTCCTGATGTTTTGCTCAATGATATTGCGGGCCCAGAAGGGGATCCTTTGCTTTTGAGTTTAAAGCTTGCTGTAGATGTTTTGGTTGTCTCTTGCCCTTGTGCACTGGGTCTTGCCACACCTACAGCGATCTTGGTTGGCACCTCCCTTGGGGCAAGAAAAGGACTTCTTATTAGAGGGGGAGATGTGCTAGAACGCTTGGCCAGTATAAATTATATTGCCCTTGACAAGACCGGAACCCTCACCAAAGGAAAACCAGTTGTCTCCTCGGTGAGCTCTATTAATTATGGAGAATCAGAAATACTTCAGATTGCTGCTGCGGTGGAGAAAACAGCATCTCATCCAATTGCAAAGGCTATTATCAATAAAGCTGAGTCATTAGAGCTGGTCCTTCCAGTTACACAAGGGCAATTGGTAGAACCAGGCTTTGGAACATTGGCAGAAATAGATGGGCGTTTAGTTGCAGTTGGATCTTTAGAATGGGTCCATGATCGCTTCCAGATTAAAATGAACCCCTCTGATTTATTGAATCTCGAACATACTTTGATGAATCATTCATCAGAGACATCTTCAAACTATTCAAAAACTGTTGTCTATGTTGGACGTGAGGAAGAAGGCATCATTGGTTCTATTACCATATCTGACGTTGTACGTGAAGATGCTCAATCTACCGTAGCAAGACTCAAGCAGAAGGGGATTGAAATGGTCCTGTTATCAGGAGACAGGGAAGAGGCAGTTGCAACTGTAGCACAGACAGTTGGGATTGGAAGCGATTTTATGAAAGCATCATTGTCCCCACAGCAGAAATCTAAGTTTATTTCATCTTTGAAAGCTTCTGGACATCATGTTGCAATGGTTGGTGATGGGATAAATGATGCACCCTCTTTGGCTGTAGCTGATGTTGGGATTGCTCTACAAAATGAAGCTCAAGAGAACGCTGCCTCTGATGCTGCATCCATTATACTTCTTGGAAACAAAATTTCTCATGTTGTTGATGCACTAGACCTCGCACAGGCAACCATGGGAAAAGTGTACCAAAATTTATCTTGGGCGGTAGCCTACAACGTTGTTGCCATTCCCATTGCTGCTGGAGTGTTACTTCCCCAATTTGAATTTGCCATGACACCTTCACTATCAGGAGGGTTGATGGCTTTGAGCTCCATCTTCGTGGTTGGCAACTCGTTGCTTCTACAACTTCATGGGTCTCAGACCTCCAAAAAGGTCGCATAA 1899 0.4376 MNSLVGFGSIAAFIISSISLLNPGLAWDATFFDEPVMLLGFVLLGRSLEEKARIQASSDMNELLSLISTQSRLVVTSSEGSPSTESVLGSNTICVEVPTDDIRVGDSVLVLPGETIPIDGKVISGRSVVDESMLTGESLPVFKEEGLTVSAGTINWDGPLRIEASSSGSNTMISKIVRMVEDAQSREAPVQRLADSIAGPFVYSVMTMSAATFAFWYYIGSNIFPDVLLNDIAGPEGDPLLLSLKLAVDVLVVSCPCALGLATPTAILVGTSLGARKGLLIRGGDVLERLASINYIALDKTGTLTKGKPVVSSVSSINYGESEILQIAAAVEKTASHPIAKAIINKAESLELVLPVTQGQLVEPGFGTLAEIDGRLVAVGSLEWVHDRFQIKMNPSDLLNLEHTLMNHSSETSSNYSKTVVYVGREEEGIIGSITISDVVREDAQSTVARLKQKGIEMVLLSGDREEAVATVAQTVGIGSDFMKASLSPQQKSKFISSLKASGHHVAMVGDGINDAPSLAVADVGIALQNEAQENAASDAASIILLGNKISHVVDALDLAQATMGKVYQNLSWAVAYNVVAIPIAAGVLLPQFEFAMTPSLSGGLMALSSIFVVGNSLLLQLHGSQTSKKVA* 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g2159 632 Gene3D - 308 440 IPR023299 GO:0000166
Ahy20g2159 632 SFLD p-type atpase 280 562 IPR044492 -
Ahy20g2159 632 PRINTS P-type cation-transporting ATPase superfamily signature 130 144 - -
Ahy20g2159 632 PRINTS P-type cation-transporting ATPase superfamily signature 297 311 - -
Ahy20g2159 632 PRINTS P-type cation-transporting ATPase superfamily signature 432 443 - -
Ahy20g2159 632 PRINTS P-type cation-transporting ATPase superfamily signature 509 528 - -
Ahy20g2159 632 PRINTS P-type cation-transporting ATPase superfamily signature 454 464 - -
Ahy20g2159 632 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 91 601 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Ahy20g2159 632 Pfam haloacid dehalogenase-like hydrolase 293 523 - -
Ahy20g2159 632 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 1 620 IPR027256 GO:0006812|GO:0016021|GO:0019829
Ahy20g2159 632 SFLD Haloacid Dehalogenase 280 562 - -
Ahy20g2159 632 SUPERFAMILY Calcium ATPase, transduction domain A 91 180 IPR008250 -
Ahy20g2159 632 Pfam E1-E2 ATPase 82 277 - -
Ahy20g2159 632 SUPERFAMILY HAD-like 295 617 IPR036412 -
Ahy20g2159 632 SUPERFAMILY Calcium ATPase, transmembrane domain M 33 291 IPR023298 -
Ahy20g2159 632 Gene3D - 288 560 IPR023214 -
Ahy20g2159 632 Gene3D - 53 184 - -
Ahy20g2159 632 ProSitePatterns E1-E2 ATPases phosphorylation site. 299 305 IPR018303 -
Ahy20g2159 632 CDD P-type_ATPase_HM 1 619 - -
Ahy20g2159 632 PANTHER ATP7, ISOFORM B 1 622 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g2159 Ahy-Chr20 120026652 120036362 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g2159 1 621 Primary Pumps ATPases AT1G63440 36.709 3.28e-114 363
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g2159 K17686 - gmx:100127402 1078.16