Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g2147 ATGCATGTAATATATCTTCTTTGCATCTCCACATTAAAGAGACGAGAAGTCAAGGAATCTCCACAATTAAAACAAACAAGGGCACGGTTTTTTCAAGATATGACTAAGATTACATGGAAATCAATCATCCCAAGTTGTTACAAGATTACCAAAAGCAAAGTAGAAGAAGAAGAGGTTTCAAAACATTGTTCTTTCCAAAGGCTATGCCTCTCTGATGTAAGCATTACAAGCTCTCCTAAGGACATTGAAGATCTTTCAACTTCTTTTGTTGGATCAAAGCTTTACACATTCACCTTAGAGGAGCTAAAAGAAGCAACGCATAATTTCTCATGGAGTAACATGCTTGGTGAAGGTGGGTTTGGACCTGTTTACAAAGGTTTTGTTGATGACAACCTTAAACGTGGTCTGAAGGCTCAATCCGTGGCAGTTAAACGGTTAGACTTGGAAGGCTTGCAAGGTCACAGAGAGTGGCTGGCAGAGATTATATTTCTTGGGCAGCTAAGGCATTCACATCTTGTTAAGTTAATTGGATACTGTTGTGAAGAAAAGAACAGGCTTTTGGTGTATGAATACATGCCAAGAGGTAGCTTAGAGAACCAATTATTCAGAAGGTATTCTTCTAGCATGCCATGGTCAACAAGGATGAAAATTGCATTAGGTGCTGCTAAGGGCCTTGCATTCCTTCATGAAGCAGATAAACCTGTCATATACAGAGATTTCAAAACTTCAAATATCTTACTTGACTCAGACTACACAGCTAAATTATCAGACTTTGGGTTAGCTAAGGATGGTCCTGAAGGAGAAGAAACACATGTAACAACAACACGCATAATGGGGACAAAGGGCTATGCTGCCCCTGAATATGTCATGGCAGGTCACCTTTCTACCAAGAGCGATGTGTATAGCTATGGAGTGGTTCTGTTGGAGCTTCTTACAGGGAAGCGAGTGGTGGATAGGAGCCGGCCGAGTCGAGAGCGGAGCCTGGTGGAATGGGCAAGGCCTATGTTGAGGGATCAAAGGAAGCTGCACCATGTGATGGACCCAAGGTTGGAAGGGCAGTTTCCTATGAAAGGAGCAGTTAAGGTTGCTGCATTGACACATAAATGCTTGAGTCACAACCCCAATCCAAGACCCTCAATGAGGGATGTTGTCAAGACATTGGAGTCACTTCAAGACTTTGATGATGTCTTCATAGCACCATTTGTTTATGTTGCAGTCAGTGAAAAGAAATAG 1233 0.4201 MHVIYLLCISTLKRREVKESPQLKQTRARFFQDMTKITWKSIIPSCYKITKSKVEEEEVSKHCSFQRLCLSDVSITSSPKDIEDLSTSFVGSKLYTFTLEELKEATHNFSWSNMLGEGGFGPVYKGFVDDNLKRGLKAQSVAVKRLDLEGLQGHREWLAEIIFLGQLRHSHLVKLIGYCCEEKNRLLVYEYMPRGSLENQLFRRYSSSMPWSTRMKIALGAAKGLAFLHEADKPVIYRDFKTSNILLDSDYTAKLSDFGLAKDGPEGEETHVTTTRIMGTKGYAAPEYVMAGHLSTKSDVYSYGVVLLELLTGKRVVDRSRPSRERSLVEWARPMLRDQRKLHHVMDPRLEGQFPMKGAVKVAALTHKCLSHNPNPRPSMRDVVKTLESLQDFDDVFIAPFVYVAVSEKK* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g2147 410 PANTHER OS01G0588500 PROTEIN-RELATED 49 409 - -
Ahy20g2147 410 SUPERFAMILY Protein kinase-like (PK-like) 85 389 IPR011009 -
Ahy20g2147 410 ProSitePatterns Serine/Threonine protein kinases active-site signature. 235 247 IPR008271 GO:0004672|GO:0006468
Ahy20g2147 410 Pfam Protein tyrosine and serine/threonine kinase 111 387 IPR001245 GO:0004672|GO:0006468
Ahy20g2147 410 Gene3D Phosphorylase Kinase; domain 1 71 191 - -
Ahy20g2147 410 CDD STKc_IRAK 115 390 - -
Ahy20g2147 410 PANTHER KINASE 1B 49 409 - -
Ahy20g2147 410 Gene3D Transferase(Phosphotransferase) domain 1 192 398 - -
Ahy20g2147 410 ProSiteProfiles Protein kinase domain profile. 109 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g2147 Ahy-Chr20 119692828 119695263 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g2147 96 387 Glycoside Hydrolase AT3G07070 52.881 1.22e-101 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Ahy20g2147 PK_Tyr_Ser-Thr 4.50E-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g2147 - - gmx:100805771 612.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g2147 20 119692828 119695263 Ahy20g2147 20 119692828 119695263 ECH
Ahy19g1121 19 20055784 20058983 Ahy20g2147 20 119692828 119695263 ECH
Ahy20g2147 20 119692828 119695263 Ahy10g1709 10 97378185 97380527 hybridization