Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g2145 ATGATGCACATGACCTTCTATTGGGGCAGGTACGTTACGATTCTCTTCGATTCGTGGAAGACCGATTCGTGGCTGAGTTACGCGCTGAGCTTGTTGGCGTGTCTCGTGGTCGCGATTTTCTACCAGTATCTTGAGAACCGCCGCATTCGCTTGAAGCTGTTCGCCACGGGGATTCCATCTTCGGCGGCGGCGCCAGAGATCGAGGCGCCTCTGCTGCGGCGGAAGTTGGCGGGGGAGAGAGCGAGGTTGGGAGTGAAGGTTGCGGGATCGGTGCTGTTTGGGGTGAGCTCGGCGATCGGGTATTTGCTGATGCTGGCGGTGATGTCATTCAACGGTGGGGTGTTTCTGGCCATCGTTTTGGGTCTTGCAATTGGCCATTTCATTTTCAGGAATGAGGGTGAAGCTTCCGTTGTTGTTGATAGTTCTTGTGCCTGTGCTTAA 441 0.5488 MMHMTFYWGRYVTILFDSWKTDSWLSYALSLLACLVVAIFYQYLENRRIRLKLFATGIPSSAAAPEIEAPLLRRKLAGERARLGVKVAGSVLFGVSSAIGYLLMLAVMSFNGGVFLAIVLGLAIGHFIFRNEGEASVVVDSSCACA* 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g2145 146 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 1 146 IPR007274 GO:0005375|GO:0016021|GO:0035434
Ahy20g2145 146 PANTHER CTR FAMILY COPPER TRANSPORTER 1 146 - -
Ahy20g2145 146 Pfam Ctr copper transporter family 4 129 IPR007274 GO:0005375|GO:0016021|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g2145 Ahy-Chr20 119627226 119628267 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g2145 1 146 Inorganic Solute Cotransporters AT5G20650 54.667 2.81e-52 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g2145 K14686 - gmx:100815028 218.779
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g2145 20 119627226 119628267 Ahy20g2145 20 119627226 119628267 ECH
Ahy16g3267 16 149361321 149362353 Ahy20g2145 20 119627226 119628267 ECH
Ahy19g1110 19 19467956 19469705 Ahy20g2145 20 119627226 119628267 ECH
Ahy20g2145 20 119627226 119628267 Ahy10g1707 10 97359027 97360128 hybridization