Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g2125 ATGGAGCACGCACCTGATAATGGAGGCAGCAATGGCGGTTTCGACAGTGGCACAAGAGAAGTGCGACCACCGGATCTTGAAGTGGATGATAAAATGGAAGAAAGAGTATTCTTTGATGAGATGATAGAAGAGTCAGATGATACAGAGGAGGAATTTCAAGGAATGTATCAAGATGAAATTGAGCAGGAAGCTGTGAATTCTGAGGATTTAGGGGAGCAAGAATTTCAAGCAATGTTTGATGGGAACGATTTTTCACATGGGGTGGATGAATTATATCGAATAGAAGATATTGAAAATATTGCCATGGTTGATTTTCTGAACATAGGTGCTCATGAGATGGAATGTTTTCATTTTCCTAATCTTCAGATTGCATTTGATTTCTATAACCATTATGCGAAATCTGTTGGTTTTGGTGCTAGAAAAAGTAAGACTTGGAAAAATAGCAAAGGAGAATATGTGAAGCAATTGTTTGTGTGCTCTTGTGAGGGATTTAGACCAGAGAAATATTATAATATGGAAAACAGAAAAAGGGAGCCAAAATCTGAGACTCGTTGTGGTTGCCTGGCTAGGTTTGTAGTTCGTTTTGTGGCTTACACTGGAAGATGGCATGTGGCTTTGTTTGTTGAATCGCACAATCATGATTGCCTTGATCCTAGGTTAGTTGGTTTCCTTCCTACACATAGAAAAATAGCAGAAGCTGATGCTAGTCAAATGAACAACATGAAGGATGCAGGCATTAGCACACCCCATATATATGCTATGTTAGCTAATCAAGCAGGTGGTTATGAAAATGTTAATTATACCTTAAGGGATATGTATAATGAGATTGCTAGGCGAAGGTGTCATGTCCTGGGTGATGCTAGAGCGGCATTGCGATACCTCAAAAACCAGAAAGCTGAAGATACAAACCTCTATTATGAGCACATAGTTGATGCTAAAGGGGTATTGCGAGCTCTATTTTGGTGTGATGGAAGAAGCAAATTAGATTATGAAGTATTTGGAGATGTGCTTGCCTTTGATGCGACATACAAAAAGAACAAGTACTTATGTCTAGTAGTAGTATTTTCCGGTGTGAATCATCACAACCAAACAGTGGTATTTGGAAGTGCTCTAGTTACCGATGAGAGTAAGGAGGTCTACGTGTGGTTATTACAGCAATTATTGGCAACCATGAAGGGAAAATCACCTGTATCTATGATTAAAGATGGTGCTCCATCAATGAGGTTTGCAATTGAGACGGTATTCCCAAATGCCTATCATAGATTATGTGCTTGGCACCTCATTCGGAACGCCACAAGTAATGTTAGAAACCCAAAATTTACATCTATGTTTAAGAAGTGCATGCTAGGAGATTATGAGATTAGTGTGTTTGAGCAGAAGTGGTTTGGAATGGTTGAGGAGTTTGGTGTAGCTGAAAAGAATTGGATTATTGACATGTACGAGAAAAGGCATATATGGGCCACTACACATATTTGA 1476 0.3916 MEHAPDNGGSNGGFDSGTREVRPPDLEVDDKMEERVFFDEMIEESDDTEEEFQGMYQDEIEQEAVNSEDLGEQEFQAMFDGNDFSHGVDELYRIEDIENIAMVDFLNIGAHEMECFHFPNLQIAFDFYNHYAKSVGFGARKSKTWKNSKGEYVKQLFVCSCEGFRPEKYYNMENRKREPKSETRCGCLARFVVRFVAYTGRWHVALFVESHNHDCLDPRLVGFLPTHRKIAEADASQMNNMKDAGISTPHIYAMLANQAGGYENVNYTLRDMYNEIARRRCHVLGDARAALRYLKNQKAEDTNLYYEHIVDAKGVLRALFWCDGRSKLDYEVFGDVLAFDATYKKNKYLCLVVVFSGVNHHNQTVVFGSALVTDESKEVYVWLLQQLLATMKGKSPVSMIKDGAPSMRFAIETVFPNAYHRLCAWHLIRNATSNVRNPKFTSMFKKCMLGDYEISVFEQKWFGMVEEFGVAEKNWIIDMYEKRHIWATTHI* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g2125 491 PANTHER OS02G0262500 PROTEIN 118 489 - -
Ahy20g2125 491 Pfam FAR1 DNA-binding domain 126 216 IPR004330 -
Ahy20g2125 491 MobiDBLite consensus disorder prediction 1 30 - -
Ahy20g2125 491 Pfam MULE transposase domain 336 430 IPR018289 -
Ahy20g2125 491 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 118 489 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g2125 Ahy-Chr20 118870334 118876608 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy20g2125 MULE 5.30E-24 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g2125 - - ahf:112782259 1003.82