Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g2077 ATGGAGGAGTGCCAGTGCCACACGGTATTTGGCAAGTATGAAATGGGGAGGCTTCTCGGGAAAGGCACGTTTGCCAAGGTGTACTACGGGAAGCAAATAGCCACGGGTGAAAGTGTGGCGATTAAGGTGATCAACAAGGAGCAGGTGAAGAGAGAAGGCATGATGGAACAGATCAAGCGCGAGATTTCGGTGATGGGCCTCGTCAAGCACCCGAATATCGTGGAGTTGAAGGAGGTCATGGCCACCAAGACCAAGATCTTCTTCGTCATGGAGTACGTTCGCGGCGGTGAACTCTTCGCTAAGATCTCCAAAGGAAAGCTCAAAGAAGATGTCGCTAGAAAGTACTTCCAGCAATTGATCAGCGCCATTGATTTCTGCCACAGCAGAGGCGTTTCTCACCGCGACCTCAAGCCGGAAAATCTCCTCCTCGACGACGACGAGAATCTTAAGATATCCGATTTCGGACTTTCCGCCTTGCCGGAGCAGTTGCGCTATGACGGCCTCCTCCACACGCAATGCGGAACTCCTGCTTACGTGGCACCGGAGGTGCTCCGGAAGAGAGGCTACGACGGATCCAAGGCTGACACGTGGTCCTGCGGCGTCATCCTCTACGTGCTGCTCGCAGGGTTCCTTCCGTTCCGCGATGAGAATCTCATGACCATGTACAATAAGGTTCTCAGAGCGGAGTTTCAGTTTCCACCGTGGTTTTCCCCGGAAGCGCGAAGGCTAATTTCGAAGATCATGGTGGCCGATCCGGAGAGGAGAACCACGATTCCAGCGATCATGCGATCGCCATGGTTCCGGAAAGGTTTTCCGGTACCTTCCGCGTTGGAATTGGAAGAAAAGGAGAAGAAGGTTGAAGAAATTTTGGAAGATTCGAGAACAAATGACAAAGTTTCGTCGCCGAAATTCTTCAACGCGTTCGAGTTTATCTCGTCGATGTCGTCCGGATTTGATTTGTCTGGACTGTTTGAGAGCAAGAGGCGGAGCGGATCGATGTTCACTTCGCGGTGTTCGGCGCCGGCGATCGTGGCGAAGATCATTGCAGCGGCGAAGGGGATGAGGTTCAGGGTGGCGGAGGTGAAGAACTTCAGGATAAAGCTGCACGGGCCATCGGAGGGGAGGAAGGGGAGGCTGGCAGTGACAGCGGAGGTGTTCGAGGTGGCGCCGGAGGTTGCCATCGTGGAGCTCTCGAAATCCGCCGGCGACACCTTGGAGTACGTTAAGTTCTGCGAGGAGGACGTTAGGCCCGCGTTGAAGGACATTGTTTGGACTTGGCAAGGTGACGCCACGTGTAACGGTAACCTCACCGCTGGTCACGGTGGGGAATGTCAACAGCAAGAGGTCGTTGCGTAA 1356 0.5428 MEECQCHTVFGKYEMGRLLGKGTFAKVYYGKQIATGESVAIKVINKEQVKREGMMEQIKREISVMGLVKHPNIVELKEVMATKTKIFFVMEYVRGGELFAKISKGKLKEDVARKYFQQLISAIDFCHSRGVSHRDLKPENLLLDDDENLKISDFGLSALPEQLRYDGLLHTQCGTPAYVAPEVLRKRGYDGSKADTWSCGVILYVLLAGFLPFRDENLMTMYNKVLRAEFQFPPWFSPEARRLISKIMVADPERRTTIPAIMRSPWFRKGFPVPSALELEEKEKKVEEILEDSRTNDKVSSPKFFNAFEFISSMSSGFDLSGLFESKRRSGSMFTSRCSAPAIVAKIIAAAKGMRFRVAEVKNFRIKLHGPSEGRKGRLAVTAEVFEVAPEVAIVELSKSAGDTLEYVKFCEEDVRPALKDIVWTWQGDATCNGNLTAGHGGECQQQEVVA* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g2077 451 SMART serkin_6 13 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g2077 451 CDD STKc_SnRK3 12 266 - -
Ahy20g2077 451 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 25-RELATED 1 436 - -
Ahy20g2077 451 PANTHER - 1 436 - -
Ahy20g2077 451 SUPERFAMILY Protein kinase-like (PK-like) 9 285 IPR011009 -
Ahy20g2077 451 ProSitePatterns Protein kinases ATP-binding region signature. 19 42 IPR017441 GO:0005524
Ahy20g2077 451 ProSiteProfiles NAF domain profile. 300 325 IPR018451 GO:0007165
Ahy20g2077 451 Gene3D Transferase(Phosphotransferase) domain 1 93 271 - -
Ahy20g2077 451 Coils Coil 276 296 - -
Ahy20g2077 451 Pfam NAF domain 302 359 IPR004041 GO:0007165
Ahy20g2077 451 ProSitePatterns Serine/Threonine protein kinases active-site signature. 131 143 IPR008271 GO:0004672|GO:0006468
Ahy20g2077 451 Gene3D Phosphorylase Kinase; domain 1 4 92 - -
Ahy20g2077 451 ProSiteProfiles Protein kinase domain profile. 13 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g2077 451 Gene3D Kinase associated domain 1, KA1 300 425 - -
Ahy20g2077 451 CDD CIPK_C 306 420 - -
Ahy20g2077 451 Pfam Protein kinase domain 13 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g2077 Ahy-Chr20 117406806 117408733 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g2077 2 442 CBL-interacting serine-threonine protein kinases AT5G25110 69.799 0.0 649
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Ahy20g2077 Pkinase 2.90E-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g2077 - - gmx:100817520 723.005
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g2077 20 117406806 117408733 Ahy20g2077 20 117406806 117408733 ECH
Ahy20g2077 20 117406806 117408733 Ahy10g1634 10 94694404 94696437 hybridization