Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g2072 ATGGCAAAGTGTCACCGGAACAACGTCGGATCCGTCGTACTCGACCACCGCCACCCTGCCAAGAATGCTGCCACCGCCGGCCACTTCCGCTGGAACTCCATCTCCGCCTCCTCCATCCGCCGGATCGTTCTCGACGCCGTCAGCTGCGGCACCTCACGCTACGGTTACCATCAGCGCCACGACGACGACGATGAAGGATCCAGCTCCGCCGCAACTTCTACAGCGAGTCTGGCCTCCGGCAGCCGCAGGGAGAACCGGCCAGATCAGAAAACAGAGAAGCTCGCGGATCTGCTGAACTTAACGGGGTGCGAGAATGAGGCGGAGGCGAAGAAGAAGGAAGAGGCGCTGGTGGAGCTGAAGCAAGTGGTGAAGGACCTGCAGCAGGGAGAGGACTTGGCGAAGCGCCGCATGGCGGCGACGACGGTGAGGTCGCTTGCGAAGGAACGATCGGAAGTTAGGGGAACGCTCGCTATGCTTGGAGCTATTCCTCCGCTCGTCGGAATGCTCGATTCCGAAGACGTTCATTCTCAGATTGCTTCGCTCTATGCGTTGCTCAATCTCGGGATCGGCAACGATGCAAACAAAGCAGCCATCGTTAAAGTTGGTGCTGTTCACAAGATGTTGAAGTTAATTGAATCACCGGATGCTACTAATTCATCAGTTTCTGAAGCAATTGTTGCTAATTTCCTTGGATTGAGTGCTTTGGATTCAAATAAACCAATAATTGGATCCTCTGGTGCAATTCCATTCCTAGTTAGAACCCTTCAAGATTTGGATTACGAATGTAGCCACCAAGCCAAGCAAGATGCTCTTCGAGCTCTGTACAATCTATCAATCTTTCCAACCAACAGTTCATTCATTTTGGAAACTGAGTTGGTCCCCTTTTTGGTTAGTTCAATTGGAGACATGGAAGTGAGTGAGAGAGTGCTTGTGATTCTAAGCAATCTGGTTCCAACTCCAGAGGGCAGGAAAGCTATCAGTGCTGTAAAGGATTCGATCTTCATTCTGGTGGATGTGTTGAATTGGACGGATTCGCCGGAGTGCCAAGAGAAGGCGTCATACATTTTGATGATTATGGCACACAAATCCTACAGCGACAGGCAGGTCATGATTGAGGCTGGGATTGGATCATCACTGCTTGAATTGACCCTTCTTGGTTCTACATTGGCACAGAAAAGGGCCTCAAGGATCTTGGAATGTTTGAGGACGGACAAAGGGAAACAAGTTTCTAGAAGCTATGGTCGAGGAAGCTTGGGGGCCGATATCTCTGCGCCTATTTTCAGCGCGTCGCCGTCTTTTACGAAGGCTTCGGGTGGAGGAGGTAAAGGCTATTTGGAGGAAGAGGAGGAGGAGGAAGATACGATGAGTGAGGAGAAGAAAGCAGTGAAGCAATTAGTCCAACAGAGTTTGCAAAACAACATGAGGAAAATTGTCAAGAGGGCCAACTTGCGTCAAGATTTTGTTCCATCCCAGCATTTGGCTTCACTTACTTCAAGTTCAACTTCTAAGAGCCTGCCATTTTAA 1524 0.502 MAKCHRNNVGSVVLDHRHPAKNAATAGHFRWNSISASSIRRIVLDAVSCGTSRYGYHQRHDDDDEGSSSAATSTASLASGSRRENRPDQKTEKLADLLNLTGCENEAEAKKKEEALVELKQVVKDLQQGEDLAKRRMAATTVRSLAKERSEVRGTLAMLGAIPPLVGMLDSEDVHSQIASLYALLNLGIGNDANKAAIVKVGAVHKMLKLIESPDATNSSVSEAIVANFLGLSALDSNKPIIGSSGAIPFLVRTLQDLDYECSHQAKQDALRALYNLSIFPTNSSFILETELVPFLVSSIGDMEVSERVLVILSNLVPTPEGRKAISAVKDSIFILVDVLNWTDSPECQEKASYILMIMAHKSYSDRQVMIEAGIGSSLLELTLLGSTLAQKRASRILECLRTDKGKQVSRSYGRGSLGADISAPIFSASPSFTKASGGGGKGYLEEEEEEEDTMSEEKKAVKQLVQQSLQNNMRKIVKRANLRQDFVPSQHLASLTSSSTSKSLPF* 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g2072 507 PANTHER ARMADILLO/BETA-CATENIN-LIKE REPEAT PROTEIN 1 507 - -
Ahy20g2072 507 MobiDBLite consensus disorder prediction 58 89 - -
Ahy20g2072 507 MobiDBLite consensus disorder prediction 434 460 - -
Ahy20g2072 507 Gene3D - 262 413 IPR011989 -
Ahy20g2072 507 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 1 507 - -
Ahy20g2072 507 SMART arm_5 149 189 IPR000225 GO:0005515
Ahy20g2072 507 SMART arm_5 191 234 IPR000225 GO:0005515
Ahy20g2072 507 SMART arm_5 235 279 IPR000225 GO:0005515
Ahy20g2072 507 Coils Coil 445 468 - -
Ahy20g2072 507 Gene3D - 88 261 IPR011989 -
Ahy20g2072 507 SUPERFAMILY ARM repeat 118 399 IPR016024 -
Ahy20g2072 507 Coils Coil 109 129 - -
Ahy20g2072 507 MobiDBLite consensus disorder prediction 68 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g2072 Ahy-Chr20 117122927 117125230 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g2072 126 415 U-box Gene Family AT1G67530 29.966 1.15e-27 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g2072 - - zju:107422474 578.556
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g2072 20 117122927 117125230 Ahy20g2072 20 117122927 117125230 ECH
Ahy20g2072 20 117122927 117125230 Ahy10g1630 10 94331293 94333447 hybridization
Ahy16g3185 16 148220213 148223935 Ahy20g2072 20 117122927 117125230 PCT
Ahy6g2490 6 109786736 109790378 Ahy20g2072 20 117122927 117125230 PCT
Ahy20g2072 20 117122927 117125230 Ahy16g3185 16 148220213 148223935 PCT
Ahy20g2072 20 117122927 117125230 Ahy6g2490 6 109786736 109790378 PCT