Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g2070 ATGGTAGATTTATCAGAAGAAACAAATGAGTTGATGATCACAATGATACCACCATGGAAAGAAGATTGTCAATTGATTTCTCAAAACATGAAAAAAACCCAAATTGCACAACACAATTCTACATTAATTACTTTTTCCAGGCCAATTATAGCAAAAAAAGTACCAAAATTAGGCATGGAATTTGACACAGTACTAGAAGCTAAAGACTTCTGGAAAAGTTATGGTGGAATGATGGGTTTTGATGTTCGACAATTGTATGCAAATAAATGCAAGCTTGATAATTCTGTAAGTAGTTTTAGACTTATTTGTGCAAAGGAAGGCCAACGAAGACCAGATAAACGGGATCATTTAACAAAGCAACCTCTCGCCGAGACTAGAACAAGTTGTCAAGTAAGAATGTCACTCAAGTTTGCTCGAGATATAAAAAAATATGTGATTTGTGACCTTGAGTTAAATCACAATCATATTTTGCAAATTCCGGAAACCAGTCATATGATGCCATCACAAAGAAAGATTTCAGAAGTACAAGCATTGCAAATAGATTTGGCAGATGAAGCTGGCATAAGACCAAAGGAAACTCATGAACTAACAAGTTTACAAGCTGGTGGTAAAGATGTCCTTGGATATACCAAACAAGACCAAAAGAACTATCTTCGAAGCAAACGAAAGCAAGACTTGGCCTATGGCGAAGCAGGTAGTTTATTAAAGTATTCTCATCGACAACTACTTAATAATCCCTCATTTCAATATGCTATACAGTTAGATAACGAAGAGAAAATAACAAATATTTTTTGGGCTGATGCAAGAATGGTTATTGATTATGCTATCTTTGGTGATGTAATCACATTTGACACTACATACTGCACAAACAAAGAAATTAGACCATTGGGTGTTTTTTGTGGATTCAATCACCATCGAGAAATAGTAATATTTGGCGCTGCTCTTTTGTATGACGAATCAAAAGAATCTTTTATGTGGTTATTTGAATCATTTTTGGAAGCTCACATGCAAAAAAAGCCTAAAACTATTTTCACTGATCAAGATCCTGCAACGGCAAGTGCTTTGGTAGAAAAAATGCCTGAAACATATGATGGATTATGTGTCTGGCATATTATGCAAAATGCTATTCGACATTTAGGGAATAAGTTGAAAGATGGTTCTTTTATCTTGAGAGATTTCAAAGCTTGTATGTATAATTCTGAAGATCAGTTTCAATTTCAAGAGTCATGGGATGCATTGCTTCAAAGATACAAAGTGGAAGACAATTCTTGGTTGAAGAGTATTTATAAAGTGAAGGAAAAATGGGCTCATTGCTATATGAAGAAGGTGTGTACTATTGGAATGCGAAGCACTCAACTTAGTGAAAGTTTTAACAGTGATTTGAAAGATTTTATGCGGTCAAGTTTAGACATAATACATTTTCTCAAACAGTTTGAGCGAGTTGTTGGTGGCAAGCGATACAAAGAGCTACAAGCTGAATACAATGCAAGACAAAAGCTTCCTAGACTTAAGATGATTCACTCGCCGTTATTGAAGCATGCTGCACAGAGTTCTGCTGCATATATTGTTTCTCGTACAGAGAACAATCAAATATCTGAATATCAAGTTGCATATATTGTTTCTCCGCAGTTGGCCCAACAACCGTCAATGTGA 1653 0.3527 MVDLSEETNELMITMIPPWKEDCQLISQNMKKTQIAQHNSTLITFSRPIIAKKVPKLGMEFDTVLEAKDFWKSYGGMMGFDVRQLYANKCKLDNSVSSFRLICAKEGQRRPDKRDHLTKQPLAETRTSCQVRMSLKFARDIKKYVICDLELNHNHILQIPETSHMMPSQRKISEVQALQIDLADEAGIRPKETHELTSLQAGGKDVLGYTKQDQKNYLRSKRKQDLAYGEAGSLLKYSHRQLLNNPSFQYAIQLDNEEKITNIFWADARMVIDYAIFGDVITFDTTYCTNKEIRPLGVFCGFNHHREIVIFGAALLYDESKESFMWLFESFLEAHMQKKPKTIFTDQDPATASALVEKMPETYDGLCVWHIMQNAIRHLGNKLKDGSFILRDFKACMYNSEDQFQFQESWDALLQRYKVEDNSWLKSIYKVKEKWAHCYMKKVCTIGMRSTQLSESFNSDLKDFMRSSLDIIHFLKQFERVVGGKRYKELQAEYNARQKLPRLKMIHSPLLKHAAQSSAAYIVSRTENNQISEYQVAYIVSPQLAQQPSM* 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g2070 550 Pfam FAR1 DNA-binding domain 69 158 IPR004330 -
Ahy20g2070 550 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 23 516 IPR031052 GO:0006355
Ahy20g2070 550 PANTHER OS03G0181600 PROTEIN 23 516 - -
Ahy20g2070 550 Pfam MULE transposase domain 280 374 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g2070 Ahy-Chr20 116760207 116762093 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy20g2070 MULE 2.10E-24 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g2070 - - aip:107620925 1115.52