Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ahy20g2058 | ATGGAGAAACAAAAAAGGGAGGGTCCAAGTCTTGAAGATCCAAAAATCACTTGCATTGCCTTCAAAACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTTTTCAGGCTGCATCTTCATTCTTCATGTGTTGCAATTCCTCAAAAGACACACAACAAACATTGAAAATGAACCCTGTTCCTATGATTCTCTCCATGTTCCTGATCCTCCTTCTTCACCGTGCAGTTGCACAAACACAACACCACCCTCCTTTTCATTCTCCTGCACCCGCACCTGCACCTGCACCTGTTCCTGTTTCTCAACCCATTGCTCCACTTTTCACCTCCAATCCCATCCCTGCAGCTCTCTCTCCTGGATTTCAGGTTGGGGAACAACAACAGCACCGAAAAAGTTCACACAACAAAACGGTGGTTATATCTGTGGCCGTAGCCACCGGTGCAGTTGGTGCAGTTATTCTCACTTTGCTATGCTTCTGGATTTGCCATACCAAGCGTCCCTCAAAATCAAACAAGAAGAATCAAAGTCTTCACATCTCAGATACAGTGGAGAAAGGGCTCATAGGAATGAAGACGATTGGTATGAAAGGTTGTGCTCCAATCATTGATTATAAACAAATAGAGAAAAGCACGAATAATTTTGACGAAAGTAACATCTTGGGTGAAGGAGGTTTTGGATGTGTTTACAAGGCTCGTTTGGATGATAATCTTGTTGTTGCTGTTAAGAAGCTACACTGTCAAACTCAAAATGCTGAGAGAGAATTCGAGAATGAGGTCCAATTGTTGAGCAAAATTCAGCATCCCAATATAATTCCTCTGCTGGCTTGTAGCATTAATGGGGACACCAGGTTCATCGTTTATCAGTTGATGCAAAATGGATCCTTAGAAGCTCACTTACATGGACCTACTAGAGGGTCTGCATTGACTTGGAACATGAGGATGAAGATTGCTCTTGACACGGCAAGAGGATTAGAATATCTGCATGAGCATTGTCACCCTCCTGTCATCCATAGAGATATGAAATCTTCCAATATTCTTTTGGATGCAAACTTCAACGCTAAGCTATCTGATTTTGGGCTTGCCATAACTGATGGGTCCCAAAGCAAGAAGAACATTAAGCTTTCAGGCACATTGGGGTACGTAGCCCCAGAGTACCTTTTAGATGGGAAATTGACAGATAAAAGCGATGTGTATGCATTTGGGGTTGTACTTCTTGAACTTCTGTTAGGAAGGAAGCCTGTGGAGAAACTGGCACCAGCTCAATGCCAATCTATTGTCACATGGGCGATGCCGGCACTGACAGACAGATCCAAACTTAGGAACATTGTGGATCCAGTGATCAAAGATACAATGGATGTCAAGCACTTATATCAGGTTGCTGCTGTTGCTGTTCTCTGTGTTCAGCCTGAGCCAAGTTACCGTCCTCTAATCACTGATGTTCTTCATTCACTTGTCCCTCTTGTTCCCATTCATCTTGGAGGAACACTCAGATCTCATTGA | 1497 | 0.4355 | MEKQKREGPSLEDPKITCIAFKTLSLSLSLSLSPFQAASSFFMCCNSSKDTQQTLKMNPVPMILSMFLILLLHRAVAQTQHHPPFHSPAPAPAPAPVPVSQPIAPLFTSNPIPAALSPGFQVGEQQQHRKSSHNKTVVISVAVATGAVGAVILTLLCFWICHTKRPSKSNKKNQSLHISDTVEKGLIGMKTIGMKGCAPIIDYKQIEKSTNNFDESNILGEGGFGCVYKARLDDNLVVAVKKLHCQTQNAEREFENEVQLLSKIQHPNIIPLLACSINGDTRFIVYQLMQNGSLEAHLHGPTRGSALTWNMRMKIALDTARGLEYLHEHCHPPVIHRDMKSSNILLDANFNAKLSDFGLAITDGSQSKKNIKLSGTLGYVAPEYLLDGKLTDKSDVYAFGVVLLELLLGRKPVEKLAPAQCQSIVTWAMPALTDRSKLRNIVDPVIKDTMDVKHLYQVAAVAVLCVQPEPSYRPLITDVLHSLVPLVPIHLGGTLRSH* | 499 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ahy20g2058 | 498 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 334 | 346 | IPR008271 | GO:0004672|GO:0006468 | |
Ahy20g2058 | 498 | Gene3D | Transferase(Phosphotransferase) domain 1 | 289 | 488 | - | - | |
Ahy20g2058 | 498 | SMART | serkin_6 | 213 | 484 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Ahy20g2058 | 498 | Pfam | Protein kinase domain | 214 | 481 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Ahy20g2058 | 498 | PANTHER | OS01G0750732 PROTEIN | 112 | 497 | - | - | |
Ahy20g2058 | 498 | PANTHER | BNAA04G14780D PROTEIN | 112 | 497 | - | - | |
Ahy20g2058 | 498 | ProSiteProfiles | Protein kinase domain profile. | 213 | 484 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Ahy20g2058 | 498 | Gene3D | Phosphorylase Kinase; domain 1 | 179 | 287 | - | - | |
Ahy20g2058 | 498 | ProSitePatterns | Protein kinases ATP-binding region signature. | 219 | 242 | IPR017441 | GO:0005524 | |
Ahy20g2058 | 498 | SUPERFAMILY | Protein kinase-like (PK-like) | 197 | 483 | IPR011009 | - | |
Ahy20g2058 | 498 | CDD | STKc_IRAK | 219 | 486 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ahy20g2058 | Ahy-Chr20 | 116106678 | 116110416 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ahy20g2058 | 170 | 487 | Receptor kinase-like Gene Family | AT3G58690 | 45.988 | 3.60e-96 | 295 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-X | Ahy20g2058 | Pkinase | 8.90E-48 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ahy20g2058 | - | - | ahf:112784689 | 934.48 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Ahy20g2058 | 20 | 116106678 | 116110416 | Ahy20g2058 | 20 | 116106678 | 116110416 | ECH | |
Ahy20g2058 | 20 | 116106678 | 116110416 | Ahy10g1612 | 10 | 93258915 | 93262683 | hybridization | |
Ahy16g3169 | 16 | 148013799 | 148020760 | Ahy20g2058 | 20 | 116106678 | 116110416 | PCT | |
Ahy6g2469 | 6 | 109492140 | 109498466 | Ahy20g2058 | 20 | 116106678 | 116110416 | PCT | |
Ahy20g2058 | 20 | 116106678 | 116110416 | Ahy16g3169 | 16 | 148013799 | 148020760 | PCT | |
Ahy20g2058 | 20 | 116106678 | 116110416 | Ahy6g2469 | 6 | 109492140 | 109498466 | PCT |