Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g2058 ATGGAGAAACAAAAAAGGGAGGGTCCAAGTCTTGAAGATCCAAAAATCACTTGCATTGCCTTCAAAACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTTTTCAGGCTGCATCTTCATTCTTCATGTGTTGCAATTCCTCAAAAGACACACAACAAACATTGAAAATGAACCCTGTTCCTATGATTCTCTCCATGTTCCTGATCCTCCTTCTTCACCGTGCAGTTGCACAAACACAACACCACCCTCCTTTTCATTCTCCTGCACCCGCACCTGCACCTGCACCTGTTCCTGTTTCTCAACCCATTGCTCCACTTTTCACCTCCAATCCCATCCCTGCAGCTCTCTCTCCTGGATTTCAGGTTGGGGAACAACAACAGCACCGAAAAAGTTCACACAACAAAACGGTGGTTATATCTGTGGCCGTAGCCACCGGTGCAGTTGGTGCAGTTATTCTCACTTTGCTATGCTTCTGGATTTGCCATACCAAGCGTCCCTCAAAATCAAACAAGAAGAATCAAAGTCTTCACATCTCAGATACAGTGGAGAAAGGGCTCATAGGAATGAAGACGATTGGTATGAAAGGTTGTGCTCCAATCATTGATTATAAACAAATAGAGAAAAGCACGAATAATTTTGACGAAAGTAACATCTTGGGTGAAGGAGGTTTTGGATGTGTTTACAAGGCTCGTTTGGATGATAATCTTGTTGTTGCTGTTAAGAAGCTACACTGTCAAACTCAAAATGCTGAGAGAGAATTCGAGAATGAGGTCCAATTGTTGAGCAAAATTCAGCATCCCAATATAATTCCTCTGCTGGCTTGTAGCATTAATGGGGACACCAGGTTCATCGTTTATCAGTTGATGCAAAATGGATCCTTAGAAGCTCACTTACATGGACCTACTAGAGGGTCTGCATTGACTTGGAACATGAGGATGAAGATTGCTCTTGACACGGCAAGAGGATTAGAATATCTGCATGAGCATTGTCACCCTCCTGTCATCCATAGAGATATGAAATCTTCCAATATTCTTTTGGATGCAAACTTCAACGCTAAGCTATCTGATTTTGGGCTTGCCATAACTGATGGGTCCCAAAGCAAGAAGAACATTAAGCTTTCAGGCACATTGGGGTACGTAGCCCCAGAGTACCTTTTAGATGGGAAATTGACAGATAAAAGCGATGTGTATGCATTTGGGGTTGTACTTCTTGAACTTCTGTTAGGAAGGAAGCCTGTGGAGAAACTGGCACCAGCTCAATGCCAATCTATTGTCACATGGGCGATGCCGGCACTGACAGACAGATCCAAACTTAGGAACATTGTGGATCCAGTGATCAAAGATACAATGGATGTCAAGCACTTATATCAGGTTGCTGCTGTTGCTGTTCTCTGTGTTCAGCCTGAGCCAAGTTACCGTCCTCTAATCACTGATGTTCTTCATTCACTTGTCCCTCTTGTTCCCATTCATCTTGGAGGAACACTCAGATCTCATTGA 1497 0.4355 MEKQKREGPSLEDPKITCIAFKTLSLSLSLSLSPFQAASSFFMCCNSSKDTQQTLKMNPVPMILSMFLILLLHRAVAQTQHHPPFHSPAPAPAPAPVPVSQPIAPLFTSNPIPAALSPGFQVGEQQQHRKSSHNKTVVISVAVATGAVGAVILTLLCFWICHTKRPSKSNKKNQSLHISDTVEKGLIGMKTIGMKGCAPIIDYKQIEKSTNNFDESNILGEGGFGCVYKARLDDNLVVAVKKLHCQTQNAEREFENEVQLLSKIQHPNIIPLLACSINGDTRFIVYQLMQNGSLEAHLHGPTRGSALTWNMRMKIALDTARGLEYLHEHCHPPVIHRDMKSSNILLDANFNAKLSDFGLAITDGSQSKKNIKLSGTLGYVAPEYLLDGKLTDKSDVYAFGVVLLELLLGRKPVEKLAPAQCQSIVTWAMPALTDRSKLRNIVDPVIKDTMDVKHLYQVAAVAVLCVQPEPSYRPLITDVLHSLVPLVPIHLGGTLRSH* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g2058 498 ProSitePatterns Serine/Threonine protein kinases active-site signature. 334 346 IPR008271 GO:0004672|GO:0006468
Ahy20g2058 498 Gene3D Transferase(Phosphotransferase) domain 1 289 488 - -
Ahy20g2058 498 SMART serkin_6 213 484 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g2058 498 Pfam Protein kinase domain 214 481 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g2058 498 PANTHER OS01G0750732 PROTEIN 112 497 - -
Ahy20g2058 498 PANTHER BNAA04G14780D PROTEIN 112 497 - -
Ahy20g2058 498 ProSiteProfiles Protein kinase domain profile. 213 484 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g2058 498 Gene3D Phosphorylase Kinase; domain 1 179 287 - -
Ahy20g2058 498 ProSitePatterns Protein kinases ATP-binding region signature. 219 242 IPR017441 GO:0005524
Ahy20g2058 498 SUPERFAMILY Protein kinase-like (PK-like) 197 483 IPR011009 -
Ahy20g2058 498 CDD STKc_IRAK 219 486 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g2058 Ahy-Chr20 116106678 116110416 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g2058 170 487 Receptor kinase-like Gene Family AT3G58690 45.988 3.60e-96 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-X Ahy20g2058 Pkinase 8.90E-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g2058 - - ahf:112784689 934.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g2058 20 116106678 116110416 Ahy20g2058 20 116106678 116110416 ECH
Ahy20g2058 20 116106678 116110416 Ahy10g1612 10 93258915 93262683 hybridization
Ahy16g3169 16 148013799 148020760 Ahy20g2058 20 116106678 116110416 PCT
Ahy6g2469 6 109492140 109498466 Ahy20g2058 20 116106678 116110416 PCT
Ahy20g2058 20 116106678 116110416 Ahy16g3169 16 148013799 148020760 PCT
Ahy20g2058 20 116106678 116110416 Ahy6g2469 6 109492140 109498466 PCT