Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g2017 ATGCCCACTTGGTGGAGTAAAAAGTCCAGCAAGTCCAAGCAGCAGCAAGAACTGCAGCAGCCACATCAGCATGGAGGAGGAGGAGTTCGTCAATTCACCTTCACCAGATCAAACAACACCGTTTCTTCTTCTCTTTCACCTCCCAGTAAGGCCAAATCCGACAAGCCCAATCACAGCTTCGACGAAACCCTCTCCCGCAACTCACCAAGGGTCAGCAGAGACTTCTCTTCTACCCCCGCCGTAGCTTCCTCCGCCGCCGCCGCCGCCGCCGCCGGAGGCTCATCCTCCGGATTCTCATGCTTCGATTCCGACGGCGACAGGAAAGGCCACCCCTTGCCTCGCCCCTCTGTCTCCTCCACCCAAAGCTTCGGCAACGACCAAGGCCTTGTCTTCGGATCTGCCTCCGTCTCTGGTTCCAGCGTTAGTTCCACGGGCTCCTCTGATGATCAACCACCCACCCCTCGAAACACTCGTATGGATGCAACCAGAGGACAAAGTGACATAAAGTTCAATGCAAGGTCAAAAAGCCCGGGTCCTGGTTCAAGAGGGCCCACCAGCCCTACATCACCGCTTCATCCGAGGTTGCATGTTTTGAGTCTTGACTCCCCTACATGCAGGCAAGAAGATGGAAAGAGTGAGTGTCATCCGTTGCCTCTTCCGCCGGGTTCTCCAACTAGTCCTTCTTCTCTTTCCAATTCCAACACAAAACCAAATGGACTTCCAGAAAACACCACATGTAATCCATCCAAGTGGAAGAAAGGAAAGCTGCTAGGACGGGGTACATTTGGGCATGTATATGCTGGATTCAATAGTGAAAATGGACAAATGTGTGCAATAAAAGAAGTCAGGGTTGTTTGTGATGATCAAACATCAAAAGAGTGCTACAAACAACTTAATCAGGAGATACTCTTGCTTAGTCAGCTTTCACATCCGAATATTGTTCAATACTATGGGAGTGACTTGGGAGAAGAAACACTTTCAGTTTATTTAGAATATGTTTCCGGTGGTTCGATTCATAAATTACTTCAGGAATATGGGGCCTTTAAGGAGCCTGTTATTCAAAATTATACTAGGCAGATTGTCTCTGGACTTGCCTATCTTCATGGTAGAAATACAGTGCACAGGGATATCAAGGGGGCTAACATACTAGTTGATCCAAATGGTGAAATCAAGCTGGCAGACTTTGGAATGGCTAAACATATAAATGCTTCTTCCTCAATGCTTTCTTTCAAAGGAAGTCCATACTGGATGGCCCCTGAGGTTGTAATGAATACAAATGGCTATAGTCTTCCTGTTGATATATGGAGCTTGGGATGCACAATTCTTGAAATGGCAACATCGAAGCCTCCTTGGAGTCAATATGAAGGGGTAGCAGCAATATTCAAAATTGGTAACAGCAAAGATATGCCTGAACTTCCTGAGCATCTATCGAATGAGGCAAAGAACTTCATCCAGTTATGCTTACAAAGAGATCCATTGGCTCGCCCAACAGCTCAAATGCTGCTAGATCACCCATTTATTCGAGATCAGTCGGCAACAAGAGCTGCAAATGTCAGCATAACCAGGAGTGCTTTCCCCTATATGCTTGATGGGAGCCGGACACCGCCACCTGAGATTTTTTCAAATAAAACGAATGCAACTTCATTTGATGGAGACTATGCAACAAGGGCAGCCCCTCCAGCCTCACGGGCTGTAAGGAACCAAAGAGATAACTCAAGAATGATCACATCATTACCCGTATCTCCTTGTTCAAGTCCATTACGGCAGTATGGACCAGCACACAAGAGCTGTTTCCTTTCACCTCCTCATCCAACTTGCACATTGATGGGACAAAATACCCTCCCGTCATATCCGTTGAGATCGAATGCCGCCTTCACTCTTGATCCTTGGCACGAAACATCTCCATACAGATCCCACCACACACCTGGTGGATCCCCAAGATCGAGACTCATTTGA 1956 0.4739 MPTWWSKKSSKSKQQQELQQPHQHGGGGVRQFTFTRSNNTVSSSLSPPSKAKSDKPNHSFDETLSRNSPRVSRDFSSTPAVASSAAAAAAAGGSSSGFSCFDSDGDRKGHPLPRPSVSSTQSFGNDQGLVFGSASVSGSSVSSTGSSDDQPPTPRNTRMDATRGQSDIKFNARSKSPGPGSRGPTSPTSPLHPRLHVLSLDSPTCRQEDGKSECHPLPLPPGSPTSPSSLSNSNTKPNGLPENTTCNPSKWKKGKLLGRGTFGHVYAGFNSENGQMCAIKEVRVVCDDQTSKECYKQLNQEILLLSQLSHPNIVQYYGSDLGEETLSVYLEYVSGGSIHKLLQEYGAFKEPVIQNYTRQIVSGLAYLHGRNTVHRDIKGANILVDPNGEIKLADFGMAKHINASSSMLSFKGSPYWMAPEVVMNTNGYSLPVDIWSLGCTILEMATSKPPWSQYEGVAAIFKIGNSKDMPELPEHLSNEAKNFIQLCLQRDPLARPTAQMLLDHPFIRDQSATRAANVSITRSAFPYMLDGSRTPPPEIFSNKTNATSFDGDYATRAAPPASRAVRNQRDNSRMITSLPVSPCSSPLRQYGPAHKSCFLSPPHPTCTLMGQNTLPSYPLRSNAAFTLDPWHETSPYRSHHTPGGSPRSRLI* 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g2017 651 ProSiteProfiles Protein kinase domain profile. 251 507 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g2017 651 ProSitePatterns Protein kinases ATP-binding region signature. 257 280 IPR017441 GO:0005524
Ahy20g2017 651 MobiDBLite consensus disorder prediction 30 53 - -
Ahy20g2017 651 MobiDBLite consensus disorder prediction 62 83 - -
Ahy20g2017 651 MobiDBLite consensus disorder prediction 1 22 - -
Ahy20g2017 651 Gene3D Transferase(Phosphotransferase) domain 1 248 527 - -
Ahy20g2017 651 SUPERFAMILY Protein kinase-like (PK-like) 249 594 IPR011009 -
Ahy20g2017 651 MobiDBLite consensus disorder prediction 226 250 - -
Ahy20g2017 651 MobiDBLite consensus disorder prediction 114 188 - -
Ahy20g2017 651 CDD STKc_MEKK1_plant 250 507 - -
Ahy20g2017 651 Pfam Protein kinase domain 252 507 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g2017 651 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 632 - -
Ahy20g2017 651 MobiDBLite consensus disorder prediction 1 252 - -
Ahy20g2017 651 SMART serkin_6 251 507 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g2017 651 PANTHER MAP KINASE KINASE KINASE 1 632 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g2017 Ahy-Chr20 114180592 114186355 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g2017 1 569 MAP Kinase Kinase Kinase AT1G53570 56.110 0.0 548
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Ahy20g2017 Pkinase 6.70E-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g2017 K04421 - gmx:100813122 892.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g2017 20 114180592 114186355 Ahy20g2017 20 114180592 114186355 ECH
Ahy20g2017 20 114180592 114186355 Ahy10g1581 10 91902941 91908117 hybridization
Ahy13g3060 13 122876501 122881742 Ahy20g2017 20 114180592 114186355 PCT
Ahy3g2733 3 120357133 120362361 Ahy20g2017 20 114180592 114186355 PCT
Ahy13g2825 13 112229064 112236263 Ahy20g2017 20 114180592 114186355 PCT
Ahy3g2498 3 109522349 109529515 Ahy20g2017 20 114180592 114186355 PCT
Ahy20g2017 20 114180592 114186355 Ahy13g3060 13 122876501 122881742 PCT
Ahy20g2017 20 114180592 114186355 Ahy3g2733 3 120357133 120362361 PCT