Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1998 ATGGAGTTGCCAAATGGTGGTGTTACGAAACCAGAGTCTCAAAGTAAAGAAAGGCTCGCAATTTTCGAATTGGCACACATGATTAGTGTTCCTATGTCACTGGTAGCCATAATCAAACTGAAAGTCCCTCAAACCATTTGGCAACAAGGTTCCAACACTCCTCTCTCCGCTTCGGAAATTATCACACGTGTGCATCCCCATGGTAGCGCTGATCCACACAATCTTCAACGCATGCTTCGCTTGCTCACAAGCTTTAACATCTTTTTTGAGCATCTCAACCCAAATGGTGAGAGGAAGTATACCCTAACTGACATTGGTAAAACCCTTGTTGATGATGATGAAGGTCTATCCTATGCCTATTACATGCTCCAGCATCATGAGGATGCTTTGATAAATACTTGGCCATTCGTGGCGGAGGCAGTGGAGGATCCAACAACGGTGCCGTTCAAGAAGGCTAACGGCGACGGAGCGATGAGCTACTACTCAAAAAGGCCGAATATGATAAACTTGTTTGGCAAGGCTATGCGTAGTGTGTCCGTACCATTCATGAGGGAAATGCTAGAGAACTATGATGGATTCAATGGTGTTGAATCATTGGTTGATGTTGGTGGCAACTATGGTGACTGTTTAGAAATGATTATGCAAAGGTACCCTAATATCCGTAAGGGCATCAACTTCGATTTGCCCCATGTCGTTGCTCATGCACCACCTCTTCCAGGAATAATCCATGTAGGTGGTGACGCCCATGAATTTGTTCCCAATGGAGATGCTATATTCTTAAAGTGGCTAGTTACAACATCGACGGACGAGGATACCAAGAAGGTGTTTGAGAATTGTTACAAGGCACTTCCAAATGGAGGGAAATTGATTGTTGTTGAGCCCGTGCTGCCAGAGTCAACGGATGAAAGTCAAAGAACAAGGACATTACTTGGTGCTGACGTGTACAACATGACAATGTACAATCCTAAGGGGAAGCAGAGAACCGAACAACAATTCAAAGATCTTGCCAATTTTGCTGGGTTCTCTTCTTGCCGTGCCTTCTATGTTGATCCTTTCATGTCTGTTCTTGAGTTTCAGAAATGA 1083 0.4423 MELPNGGVTKPESQSKERLAIFELAHMISVPMSLVAIIKLKVPQTIWQQGSNTPLSASEIITRVHPHGSADPHNLQRMLRLLTSFNIFFEHLNPNGERKYTLTDIGKTLVDDDEGLSYAYYMLQHHEDALINTWPFVAEAVEDPTTVPFKKANGDGAMSYYSKRPNMINLFGKAMRSVSVPFMREMLENYDGFNGVESLVDVGGNYGDCLEMIMQRYPNIRKGINFDLPHVVAHAPPLPGIIHVGGDAHEFVPNGDAIFLKWLVTTSTDEDTKKVFENCYKALPNGGKLIVVEPVLPESTDESQRTRTLLGADVYNMTMYNPKGKQRTEQQFKDLANFAGFSSCRAFYVDPFMSVLEFQK* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1998 360 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 22 360 IPR016461 GO:0008168
Ahy20g1998 360 Gene3D - 7 109 IPR036388 -
Ahy20g1998 360 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 115 358 IPR029063 -
Ahy20g1998 360 Gene3D Vaccinia Virus protein VP39 110 360 IPR029063 -
Ahy20g1998 360 Pfam Dimerisation domain 32 83 IPR012967 GO:0046983
Ahy20g1998 360 PANTHER OS02G0823400 PROTEIN 11 359 - -
Ahy20g1998 360 PANTHER O-METHYLTRANSFERASE 11 359 IPR016461 GO:0008168
Ahy20g1998 360 PIRSF O-mtase 4 360 IPR016461 GO:0008168
Ahy20g1998 360 SUPERFAMILY "Winged helix" DNA-binding domain 15 112 IPR036390 -
Ahy20g1998 360 Pfam O-methyltransferase domain 137 342 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1998 Ahy-Chr20 113321838 113324975 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g1998 12 360 Monolignol Biosynthesis Gene Families AT3G53140 57.507 3.59e-151 428
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1998 - - ccaj:109819366 455.292