Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ahy20g1973 | ATGGCTGCCATGAACTCCTCTAGTGTATTGGCTTGTAGCTACGCCATTTCGGGTGGCGCTTCCAGTTCCGAGCTCAGTGGCAAGATTACTTCCTTGCCCTCTGTCTCCACCAAGTTGCCTGTGATGAAGGTGAAGGCCCAGCAAGAGAGAGCCCCCAAAGCCATCAAAGAATCTGAATTGGGAACAAGAAGAACCGCTCTTGTTTACTTGGCAGCCACACTTTTTGGCACTGCAGCTGCTGCTTCTTCTGCCAATGCTGGTGTCATTGAAGATTACCTTGAGAAGAGCAAGGCCAACAAGGAACTGAATGACAAGAAAAGGTTAGCTACTAGTGGAGCAAATTTTGCAAGAGCATACACGGTGCAATTTGGCACTTGCAAATTCCCTGAGAACTTCACTGGTTGCCAAGATCTTGCCAAGCAAAAGAAAGTGCCATTCCTTTCTGATGATTTGGAGCTTGAATGTGAAGGAAAGGACAAATACAAGTGTGGTTCTAATGTTTTCTGGAAATGGTGA | 516 | 0.4651 | MAAMNSSSVLACSYAISGGASSSELSGKITSLPSVSTKLPVMKVKAQQERAPKAIKESELGTRRTALVYLAATLFGTAAAASSANAGVIEDYLEKSKANKELNDKKRLATSGANFARAYTVQFGTCKFPENFTGCQDLAKQKKVPFLSDDLELECEGKDKYKCGSNVFWKW* | 172 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ahy20g1973 | 171 | Gene3D | - | 87 | 171 | IPR044907 | - | |
Ahy20g1973 | 171 | Pfam | Photosystem I reaction centre subunit N (PSAN or PSI-N) | 43 | 171 | IPR008796 | GO:0009522|GO:0015979 | |
Ahy20g1973 | 171 | PANTHER | PHOTOSYSTEM I REACTION CENTER SUBUNIT N, CHLOROPLASTIC | 1 | 171 | IPR008796 | GO:0009522|GO:0015979 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ahy20g1973 | Ahy-Chr20 | 111011612 | 111013075 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ahy20g1973 | 1 | 142 | Calmodulin-binding Proteins | AT5G64040 | 63.014 | 2.91e-53 | 166 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ahy20g1973 | K02701 | - | pop:7466843 | 240.736 |