Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1973 ATGGCTGCCATGAACTCCTCTAGTGTATTGGCTTGTAGCTACGCCATTTCGGGTGGCGCTTCCAGTTCCGAGCTCAGTGGCAAGATTACTTCCTTGCCCTCTGTCTCCACCAAGTTGCCTGTGATGAAGGTGAAGGCCCAGCAAGAGAGAGCCCCCAAAGCCATCAAAGAATCTGAATTGGGAACAAGAAGAACCGCTCTTGTTTACTTGGCAGCCACACTTTTTGGCACTGCAGCTGCTGCTTCTTCTGCCAATGCTGGTGTCATTGAAGATTACCTTGAGAAGAGCAAGGCCAACAAGGAACTGAATGACAAGAAAAGGTTAGCTACTAGTGGAGCAAATTTTGCAAGAGCATACACGGTGCAATTTGGCACTTGCAAATTCCCTGAGAACTTCACTGGTTGCCAAGATCTTGCCAAGCAAAAGAAAGTGCCATTCCTTTCTGATGATTTGGAGCTTGAATGTGAAGGAAAGGACAAATACAAGTGTGGTTCTAATGTTTTCTGGAAATGGTGA 516 0.4651 MAAMNSSSVLACSYAISGGASSSELSGKITSLPSVSTKLPVMKVKAQQERAPKAIKESELGTRRTALVYLAATLFGTAAAASSANAGVIEDYLEKSKANKELNDKKRLATSGANFARAYTVQFGTCKFPENFTGCQDLAKQKKVPFLSDDLELECEGKDKYKCGSNVFWKW* 172
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1973 171 Gene3D - 87 171 IPR044907 -
Ahy20g1973 171 Pfam Photosystem I reaction centre subunit N (PSAN or PSI-N) 43 171 IPR008796 GO:0009522|GO:0015979
Ahy20g1973 171 PANTHER PHOTOSYSTEM I REACTION CENTER SUBUNIT N, CHLOROPLASTIC 1 171 IPR008796 GO:0009522|GO:0015979
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Ahy20g1973 Ahy-Chr20 111011612 111013075 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g1973 1 142 Calmodulin-binding Proteins AT5G64040 63.014 2.91e-53 166
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1973 K02701 - pop:7466843 240.736