Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1963 ATGAAACGACAGAGAGCCTATGCGGTTGTGTTTGTAATACAAGCCATATATGCTGCCATGTTCCTTCTATCAAAAGCAGCATTCGATCATGGCATGAACAATTTCGTCTTTGTCTTTTACAGACAGGCCATTGCAACCCTTTTTCTCATCCCTTTTGCTCTCTTCTTCGAATGGAAAACTGCGCCGCCTTTGCCTTTCGTCACCTTCTGCAAGATCTTCCTCCTTTCATTCTGTGGCATTACTTTGAGCTTGGATGTATATGGTATTGGTCTTATATACACGTCAGCAACGTTGGCTGCTGCTACCACAAACTGTCTTCCAGTTATCACCTTCTTCTTGGCGCTCTTACTCGGGATTGAAAGCTTGAAAATAAAGACAGCAGCGGGGATTGCTAAGCTGATAGGCATTGGTGCATGCTTGGTTGGTGCAGCAATTCTTGCCTTTTACAAGGGTCCTCATTTGGAATTTCTAAGCCACTATCACATTCTAAATTACCATAAAACCCAACAACACCAAGGTCATGCTCAATCTCATACATGGATAAAGGGCTGCTTCTTCATGCTCCTCTCCAATACCTTTTGGGGGATGTGGCTTGTGCTACAGGCTTTTGTCATAAAAGGTTATCCTTCCAAGCTTCTTTTCACAACTCTTCAGTGTTTCTTAAGTTCAATTCAATCTTTTGTCATTGCCTTGGCCGTAGAAAGGAACATCGACGAATGGAAACTGGGTTGGAATCTCAGGCTCCTATCCGTAGTATACTGTGGGGTTATGGTGACCGGTGTCACATATTACTTGCAGACATGGGTTATAGAAAAGAAAGGACCTGTGTTTCTAGCAATGTCAACACCACTTAACCTCATTATCACAATCTTCGCCTCTGCAATTATCTTGGGCGAGATAACCACTTTGGGGAGGACTGTACAGTGTGCTGTGGGGAAAAAGCAGGGAGCAAATGCCCAAAGCCTCACAAGACTTGGAGCAAACATCGGTTTAATTGGAGTGAGCTAG 1008 0.4385 MKRQRAYAVVFVIQAIYAAMFLLSKAAFDHGMNNFVFVFYRQAIATLFLIPFALFFEWKTAPPLPFVTFCKIFLLSFCGITLSLDVYGIGLIYTSATLAAATTNCLPVITFFLALLLGIESLKIKTAAGIAKLIGIGACLVGAAILAFYKGPHLEFLSHYHILNYHKTQQHQGHAQSHTWIKGCFFMLLSNTFWGMWLVLQAFVIKGYPSKLLFTTLQCFLSSIQSFVIALAVERNIDEWKLGWNLRLLSVVYCGVMVTGVTYYLQTWVIEKKGPVFLAMSTPLNLIITIFASAIILGEITTLGRTVQCAVGKKQGANAQSLTRLGANIGLIGVS* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1963 335 SUPERFAMILY Multidrug resistance efflux transporter EmrE 40 150 - -
Ahy20g1963 335 PANTHER WAT1-RELATED PROTEIN 7 307 IPR030184 GO:0016021|GO:0022857
Ahy20g1963 335 Pfam EamA-like transporter family 7 141 IPR000620 GO:0016020|GO:0016021
Ahy20g1963 335 Pfam EamA-like transporter family 182 304 IPR000620 GO:0016020|GO:0016021
Ahy20g1963 335 PANTHER WAT1-RELATED PROTEIN 7 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1963 Ahy-Chr20 110108884 110113930 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g1963 1 254 Nodulin-like Gene Family AT5G64700 60.853 3.73e-98 289
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1963 - - gmx:100804562 511.146
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g1963 20 110108884 110113930 Ahy10g1530 10 89002363 89015162 hybridization
Ahy13g3102 13 124897801 124900619 Ahy20g1963 20 110108884 110113930 PCT
Ahy3g2777 3 121784368 121786800 Ahy20g1963 20 110108884 110113930 PCT
Ahy20g1963 20 110108884 110113930 Ahy13g3102 13 124897801 124900619 PCT
Ahy20g1963 20 110108884 110113930 Ahy3g2777 3 121784368 121786800 PCT