Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1957 ATGGTCTTATCTAAGTACATAAAGAATGGAAGCCTCCATGATATTTTGCATGAGAAATATCCTTTACCACCCTTAAATTGGAGTATACGGCTTAACATCGCTGTTGGAATTGCACATGGACTAAAATATCTGCATTATGACCACACCACACCCATAGTACACCGAGACATAAAGCCACATAATATACTTCTTAATGATCAGATGAAGCCTCTTATATCTGATTTTTGTACTTCCTTCTATAGGAACCTTGCTGAGCATTCTTATTGTCAATCTCATTCTTGGAAAAAGCTTTTAACATATGTTGTAGGTACTGCTGGTTATATCGCACCAGAGAATGCATATGTAATAGTGCAGAGCAAAAAGTCTGATGTATACAGCTATGGGGAGGTTGTTGATCTAGACATTGCAAATGCATTTCCCAATTCAAGAGTATTGGCAAGGCAAGTCACTGAGGTGCTTTTGTTGGCATTAAGATGTACTAAGAGGAAGCCTCGTGAGAGACCAACCATGAAAGACATTACTAGCTTCTATCAGAAAAACATATTCAAGTTGAGTTGCGATGATGTGGATATGGTTAATGAAAATATTGTTAATGTGAATGAACCTCAAGATTCTAATGGTTTCATCTGGTGGTGGCAAGATCTTAGTCAATCTGAAGATTCTTTGGTTGATTGGAATGTGATGGCTACAACTAAAACTGTTGTTGATGGATTCATAGTTAAATTAATAGGCAATGGTAAGATATATACTGAACAGACTCAGTATATGTACCAGCAGAAATCTTTGAAATCACAGCTCAAGTCCTGCTTTATAGCACCTATAAAGGACCCTTCATCTTGTGTTATTGTGTGTAACAATGAAGTAAATGATCGATGA 876 0.3676 MVLSKYIKNGSLHDILHEKYPLPPLNWSIRLNIAVGIAHGLKYLHYDHTTPIVHRDIKPHNILLNDQMKPLISDFCTSFYRNLAEHSYCQSHSWKKLLTYVVGTAGYIAPENAYVIVQSKKSDVYSYGEVVDLDIANAFPNSRVLARQVTEVLLLALRCTKRKPRERPTMKDITSFYQKNIFKLSCDDVDMVNENIVNVNEPQDSNGFIWWWQDLSQSEDSLVDWNVMATTKTVVDGFIVKLIGNGKIYTEQTQYMYQQKSLKSQLKSCFIAPIKDPSSCVIVCNNEVNDR* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1957 291 Gene3D Transferase(Phosphotransferase) domain 1 1 206 - -
Ahy20g1957 291 ProSitePatterns Serine/Threonine protein kinases active-site signature. 52 64 IPR008271 GO:0004672|GO:0006468
Ahy20g1957 291 SUPERFAMILY Protein kinase-like (PK-like) 4 175 IPR011009 -
Ahy20g1957 291 ProSiteProfiles Protein kinase domain profile. 1 177 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g1957 291 PANTHER OS08G0446200 PROTEIN 129 187 - -
Ahy20g1957 291 SMART serkin_6 1 177 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g1957 291 Pfam Protein kinase domain 3 131 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g1957 291 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 129 187 - -
Ahy20g1957 291 PANTHER OS08G0446200 PROTEIN 1 130 - -
Ahy20g1957 291 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 1 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1957 Ahy-Chr20 109856404 109857960 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g1957 1 173 Receptor kinase-like Gene Family AT1G17750 39.352 3.56e-37 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Ahy20g1957 Pkinase 3.60E-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1957 - - ahf:112786141 602.053