Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1945 ATGGCGACAAGGAAGTTCGACACGGAGAATCTTGTGTTCGCTGCAAGGCCTGGCTATGGCCACCTTGGAACAAAATGTGTCGTCAAAGCTAACCACTTCCTTGCAGATATTTCAGCATCTGACCTCAGCCGTTACACTGTAAGTGCTCAGCTTTTTGTTCCTGATATATATACCCGTACTATAACTACTGTTTTAAGCAAATTGGTTAAGATAATACCTGAAGTGAGGTGTTGCAAAACAAGCAAAGCTATAATAGCTGAGTTGGTGAGGGTTCATAAGAACACTGAGTTCGGGATGAGGCTTCCTGTTTATGATGGAGGAAGGAATATTTACACTGCTGCCATGCTTCCTTTCACATACAAAGAGTTCACTATATTATTGATTGAAGATGATGAGAGTATTGGTACTACCAGGGAAAGAGAGTTTAATGTGGTAATCAAGTTTGCTGCTCGTGTTAGCATGCATCAATTACGTGAGCTTCTCAGTGGAAAACAAGTGGATACACCACAAGAAGCACTTACTATTATTGACATTGTTAGAGGGAGCTTGCAGCACAGAGGTGAAAATCTTGAATTTTTGTGTCTTCTTGTTCTTTCTTTCATAACATGTTCTTGTGTTTCTCATGCCATCATTATTCTTCATATTTAG 648 0.3997 MATRKFDTENLVFAARPGYGHLGTKCVVKANHFLADISASDLSRYTVSAQLFVPDIYTRTITTVLSKLVKIIPEVRCCKTSKAIIAELVRVHKNTEFGMRLPVYDGGRNIYTAAMLPFTYKEFTILLIEDDESIGTTREREFNVVIKFAARVSMHQLRELLSGKQVDTPQEALTIIDIVRGSLQHRGENLEFLCLLVLSFITCSCVSHAIIILHI* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1945 215 PANTHER PROTEIN ARGONAUTE 10 7 71 - -
Ahy20g1945 215 PANTHER PROTEIN ARGONAUTE 10 69 184 - -
Ahy20g1945 215 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 69 184 - -
Ahy20g1945 215 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 7 71 - -
Ahy20g1945 215 Pfam N-terminal domain of argonaute 24 179 IPR032474 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1945 Ahy-Chr20 108625204 108627263 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g1945 1 179 Eukaryotic Initiation Factors Gene Family AT5G43810 47.514 5.96e-50 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1945 K11593 - ahf:114926131 424.861