Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1930 ATGGGATGTGTCTTCGGCCGGTTAATGGTCGATTCTCCACCTCGCAAACAGGTCAAGTCTAAGCGGCGTCACGGTCACCATGGCAACAAAGCTATGACCAAGAAAGGTTCAAGGAAACATCATCCTTCTAAGTATGCGGATATGAAAAGGGAGAGTAGGAGACAGAGTGTGAAGGAGAATAATAATAATAATAATATTAAGAATAATTTATCCGGAGCAGTTGAACAGCAGGTTTTGCGAGGTGGAAAAGAAAGTTTGGCTGCTCCCAAAGAAGAGAAGAAGATTGAGAGAGAAGACGATGATGAAGAGAAGAATATTGCAGGATATGAATTTGTTGATGGATGGCCAAAGTGGCTGGTTGATAATATCCCAAGATATGTTCTTGATACTCTTGTTCCAAAGAGTGCTGATTCCTATATAAAACTGGGAAAGGTAGGATGTGGAACATATAGCAATGTGTACAAAGCAAGAGATAAGCGAAGTGGGAAGATTGTTGCTTTGAAGAAAGTGAGGTTTGACACATCTGATCCTGAGAGTATAAAGTTTATGGCGAGAGAGATTATGATACTTCACACATTAGATCATCCGAATGTGATCAAGCTTGAAGGAGTAGCAACATCAAGAATGCAATACAGTATATATTTGGTTTTTGAGTTCATGCATGCTGACCTTACACGAATTATAGCCCGACCGGCGGTGAGACTAACTGAACCACAGATAAAGTGTTACATGCAACAACTGCTTTGTGGGCTCCAATACTGTCACGAAAAGGGTGTTATCCACCGAGATATTAAATCTTCAAACTTGTTAGTAGACACAAGAGGGGTGCTGAAAATTGCAGATTTTGGTCTTGCACATTCTTTTGACATCAAATCCAATGGCCCTCTTACAAATAAAGTGGTGACTCTTTGGTATAGAGCTCCTGAACTTCTCTTAGGTTCAACTAATTATGGATTTGGAGTTGATCTCTGGAGTGCTGGATGCCTATTGGCTGAAATGTTCGTTGGAAGACCGATAATGCCGGGAAGAACAGAGGTTGAACAGCTTCACATGATCTTCAAACTTTGTGGTTCTCCTTCAGATAATTACTATAGAAAACTGAAGTTAACAAGCAGCCATCGTCCGTCACAACGTTACAGACCTAACTATAACGGAAACTTCCCGAACCTTCCTTCGTCTTTCCTTCATCTCTTGGCCACGCTTCTTGATCTTGACCCTTCACACCGTGGCACCGCTGCCTCTGCTCTTCGAAGTGAATTTTTCAATTCAAGTCCGTTACCGTGCGACCCTTCAGACTTACCAGCAATCTACAATAATAATAATGATGAGGATGAACGAATTCATCAAAAGAGACGTAGACACAGGGTTCCGAAAAGAGGGCAAGTGTCTCAACCCAATACAAATCATGTTAGTCAATTGGAAAAGAACAACCAAACAGCTGAACATTTCAAGAGAGATTCAGAATCGTCCACCAAAGAGGATAAGAAAGAACAAGAGAAGCAGGGGCAAGAAACAGGCACTGTTAGTTCAAGCAGCACATCATCGAGCTCCAAAAATATTATGAACATGAATAATGCATCCTCAACAACATCATCAATTTTCTCTAGTAATGGCAAAACTGAAGCACATCCCAATTATGCTCTCTTACACCCATATGTGATTGGAGTGATCAATCATAATAATAAGAACGAAGCCAATAATGAATCCCACCAACGTAAGACCCTCTCAGCATTGGATCTAAGATTTGATACAGAGAAGCTATCAAATCTTTCTGAATAG 1779 0.4081 MGCVFGRLMVDSPPRKQVKSKRRHGHHGNKAMTKKGSRKHHPSKYADMKRESRRQSVKENNNNNNIKNNLSGAVEQQVLRGGKESLAAPKEEKKIEREDDDEEKNIAGYEFVDGWPKWLVDNIPRYVLDTLVPKSADSYIKLGKVGCGTYSNVYKARDKRSGKIVALKKVRFDTSDPESIKFMAREIMILHTLDHPNVIKLEGVATSRMQYSIYLVFEFMHADLTRIIARPAVRLTEPQIKCYMQQLLCGLQYCHEKGVIHRDIKSSNLLVDTRGVLKIADFGLAHSFDIKSNGPLTNKVVTLWYRAPELLLGSTNYGFGVDLWSAGCLLAEMFVGRPIMPGRTEVEQLHMIFKLCGSPSDNYYRKLKLTSSHRPSQRYRPNYNGNFPNLPSSFLHLLATLLDLDPSHRGTAASALRSEFFNSSPLPCDPSDLPAIYNNNNDEDERIHQKRRRHRVPKRGQVSQPNTNHVSQLEKNNQTAEHFKRDSESSTKEDKKEQEKQGQETGTVSSSSTSSSSKNIMNMNNASSTTSSIFSSNGKTEAHPNYALLHPYVIGVINHNNKNEANNESHQRKTLSALDLRFDTEKLSNLSE* 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1930 592 MobiDBLite consensus disorder prediction 503 537 - -
Ahy20g1930 592 Gene3D Phosphorylase Kinase; domain 1 129 221 - -
Ahy20g1930 592 MobiDBLite consensus disorder prediction 17 43 - -
Ahy20g1930 592 PANTHER CYCLIN-DEPENDENT KINASE 84 564 - -
Ahy20g1930 592 SUPERFAMILY Protein kinase-like (PK-like) 134 429 IPR011009 -
Ahy20g1930 592 MobiDBLite consensus disorder prediction 58 75 - -
Ahy20g1930 592 MobiDBLite consensus disorder prediction 431 537 - -
Ahy20g1930 592 MobiDBLite consensus disorder prediction 478 502 - -
Ahy20g1930 592 MobiDBLite consensus disorder prediction 85 101 - -
Ahy20g1930 592 ProSitePatterns Serine/Threonine protein kinases active-site signature. 259 271 IPR008271 GO:0004672|GO:0006468
Ahy20g1930 592 ProSitePatterns Protein kinases ATP-binding region signature. 145 168 IPR017441 GO:0005524
Ahy20g1930 592 MobiDBLite consensus disorder prediction 1 101 - -
Ahy20g1930 592 PANTHER CELL DIVISION PROTEIN KINASE 84 564 - -
Ahy20g1930 592 Gene3D Transferase(Phosphotransferase) domain 1 222 462 - -
Ahy20g1930 592 Pfam Protein kinase domain 139 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g1930 592 MobiDBLite consensus disorder prediction 460 477 - -
Ahy20g1930 592 ProSiteProfiles Protein kinase domain profile. 139 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g1930 592 SMART serkin_6 139 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1930 Ahy-Chr20 107943420 107947192 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g1930 134 469 Core Cell Cycle Gene Families AT5G10270 43.662 1.42e-94 297
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Ahy20g1930 Pkinase 4.10E-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1930 K08819 - gmx:100782603 583.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g1930 20 107943420 107947192 Ahy10g1512 10 86860725 86863494 hybridization