Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1927 ATGTTTGAAGAGCAGGTGATGATTGATGAGATCCCTCCTCCTTTCCAATTCGGATGCCTTGAATCTTTGAACAATAATAACAATAATAAAGCTTTCCTTGGTGCCATAGCTTCTCCACCACCAGATCTCGTCACTTCTTCTTGTTTGGGGGCAAATAATAATTCATGGGCATGGGGTCAGGTAACAGCAGAAGATTGTGTGATGATGATGAGGGTGGGTAACAAAAGAGGAGGAGATGTTCATAGCCATGTAGGGTTAGGGATTGCAGCGATGAAGATGAAAATGAAGACGACCAAAGTGAGAAGGAAGGTGAGGGAGCCTAGGTTTTGCTTCAAGACCATGAGTGATGTCGATGTTCTCGACGACGGTTACAAATGGAGAAAGTACGGCCAGAAAGTCGTCAAGAACACACAACACCCCAGAAGCTACTACCGTTGCACAGAAGAAAAGTGTAGAGTGAAGAAACGAGTGGAGCGCTTAGCTGAGGATCCAAGGATGGTTATAACAACGTATGAAGGAAGACATGTTCATTCTCCCTCCAACGACCTCCAAGCATCCGAAACTACTTCTCAACTCACCGATTTCCTGTGGTAG 594 0.4512 MFEEQVMIDEIPPPFQFGCLESLNNNNNNKAFLGAIASPPPDLVTSSCLGANNNSWAWGQVTAEDCVMMMRVGNKRGGDVHSHVGLGIAAMKMKMKTTKVRRKVREPRFCFKTMSDVDVLDDGYKWRKYGQKVVKNTQHPRSYYRCTEEKCRVKKRVERLAEDPRMVITTYEGRHVHSPSNDLQASETTSQLTDFLW* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1927 197 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 51 187 IPR044810 GO:0003700
Ahy20g1927 197 SUPERFAMILY WRKY DNA-binding domain 112 179 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy20g1927 197 ProSiteProfiles WRKY domain profile. 115 180 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy20g1927 197 PANTHER WRKY TRANSCRIPTION FACTOR 13-RELATED 51 187 - -
Ahy20g1927 197 SMART WRKY_cls 120 179 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy20g1927 197 Pfam WRKY DNA -binding domain 121 177 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy20g1927 197 Gene3D WRKY domain 107 173 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1927 Ahy-Chr20 107616979 107621263 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g1927 79 197 WRKY Transcription Factor Family AT4G39410 71.774 3.12e-59 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Ahy20g1927 WRKY 8.80E-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1927 - - gmx:100799241 214.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g1927 20 107616979 107621263 Ahy10g1506 10 86434051 86436640 hybridization