Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1926 ATGATCACGATTTTGCACACCAAGTACCATCCTGGACAAATTGAGGCTGCAGCCATAATGGAACACATTTTGGATGGTAGCTCATATGTCAAAGCCGCCAAGAAGTTGCACGAGATTGATCTGTTGCAAAAGCCTAAACAGGGCAAATATGCACTTAAGACTTCACCTCAATGGCTTGGCCCTTTGATTGAAGTGATTAGATTCTCAACCAAATCAATTGAGAAGGAAATTAACTCTGTTAACGACAACCCTTTGATTGATATGTCAAGGAACAAGGCTTTGCATGGTGATTGGTCATTGCATCAATTGGGAAACTCATGCTTGCCTTCAAATCTAAGTGCTAGTAGAAACCCCAGCTTGGATTATGGCTTCAAGGGAACTGAAATCGCAATGGCTTCTTACTGTTCCGAATTGCAATATCTTGCAAACCCGGTAACTAGCCATGTCCAAAATGTTGAGCAACATAACCAAGATGTGAACTATCTTGGTTTGATTTTAGCTAGGAAAACAAATGAAGCTGTTGAGATTCTCAAACTTATGTCATCGGCTTATGTAACACCCTAA 564 0.406 MITILHTKYHPGQIEAAAIMEHILDGSSYVKAAKKLHEIDLLQKPKQGKYALKTSPQWLGPLIEVIRFSTKSIEKEINSVNDNPLIDMSRNKALHGDWSLHQLGNSCLPSNLSASRNPSLDYGFKGTEIAMASYCSELQYLANPVTSHVQNVEQHNQDVNYLGLILARKTNEAVEILKLMSSAYVTP* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1926 187 PANTHER PHENYLALANINE AMMONIA-LYASE 105 185 - -
Ahy20g1926 187 PANTHER PHENYLALANINE AMMONIA-LYASE 7 96 - -
Ahy20g1926 187 Pfam Aromatic amino acid lyase 103 184 IPR001106 -
Ahy20g1926 187 Pfam Aromatic amino acid lyase 4 96 IPR001106 -
Ahy20g1926 187 Gene3D Fumarase/aspartase (Central domain) 103 186 - -
Ahy20g1926 187 Gene3D Fumarase/aspartase (Central domain) 6 96 - -
Ahy20g1926 187 SUPERFAMILY L-aspartase-like 4 184 IPR008948 GO:0003824
Ahy20g1926 187 PANTHER HISTIDINE AMMONIA-LYASE 105 185 IPR001106 -
Ahy20g1926 187 PANTHER HISTIDINE AMMONIA-LYASE 7 96 IPR001106 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1926 Ahy-Chr20 107548189 107548805 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g1926 8 185 Monolignol Biosynthesis Gene Families AT2G37040 67.788 9.99e-93 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1926 K10775 - ahf:112786110 376.711