LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ahy20g1923	ATGGCTACTCCCACCTCAGATTTCATGTTATCTGATTATCTATTGCTTGATGATGATGTTATTATGATTGATAATCATCATCAACATCAAGATCAAGAGTCTTGGTCACAGAGTACTGAATCATCTTCGTTGGCAGCAGCATCAAGCAATGTCAATCACGAATTTGGTGGTGCAACAACCTCCAGCCACAATAACAACATAAAATGCAAAAATAATGTGAGTAAGCGAAACAAGCAGGTAGAAGCGAGGCAAAGGGTGGTGTTCAGAACTAGATCGGAGCTAGAGGTCATGGATGATGGATTTAAATGGAGGAAGTATGGAAAGAAGTCAGTAAAGAACAGTCCCAATCCTAGGAACTATTACAAGTGCTCGAGTGTAGGATGCGGTGTGAAGAAAAGAGTGGAAAGGGATGCAGAAGACAGGAGCTATGTGTTAACAAGTTATGACGGTGTTCACAATCACCAAAGCCCTTCTTCTAACTCCTACTACACTACTTCTCCATTCTCCATCTTCCATTCTAATGATATTAATTGGTCCCTCCATGCTCCTGCTGTAAACTCATCATCCTCTAATTCCTAG	579	0.4111	MATPTSDFMLSDYLLLDDDVIMIDNHHQHQDQESWSQSTESSSLAAASSNVNHEFGGATTSSHNNNIKCKNNVSKRNKQVEARQRVVFRTRSELEVMDDGFKWRKYGKKSVKNSPNPRNYYKCSSVGCGVKKRVERDAEDRSYVLTSYDGVHNHQSPSSNSYYTTSPFSIFHSNDINWSLHAPAVNSSSSNS*	193

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ahy20g1923	192	ProSiteProfiles	WRKY domain profile.	92	157	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Ahy20g1923	192	PANTHER	WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED	5	162	IPR044810	GO:0003700
	Ahy20g1923	192	Pfam	WRKY DNA -binding domain	98	155	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Ahy20g1923	192	SUPERFAMILY	WRKY DNA-binding domain	89	157	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Ahy20g1923	192	MobiDBLite	consensus disorder prediction	34	48	-	-
	Ahy20g1923	192	PANTHER	WRKY TRANSCRIPTION FACTOR 50-RELATED	5	162	-	-
	Ahy20g1923	192	SMART	WRKY_cls	97	156	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Ahy20g1923	192	MobiDBLite	consensus disorder prediction	28	48	-	-
	Ahy20g1923	192	Gene3D	WRKY domain	84	150	IPR036576	GO:0003700\|GO:0006355\|GO:0043565

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Ahy20g1923	Ahy-Chr20	107449633	107452435	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Ahy20g1923	46	182	WRKY Transcription Factor Family	AT5G64810	52.899	3.20e-41	136

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	WRKY	Ahy20g1923		WRKY	4.50E-22	CL0274