Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1909 ATGGCCAAGCACCAATTGAATTACTCCGATTGCCACAGCACCGCAATCAACACCAAGCTCCGTCGTCAGCTCCCTCCAGCTCACGATGACACCGATTATCGAACCCATCAAAGTCTTCGTTCTCGCTACCTTGCCTTCAACAACATGATTAACGATGAAAGGGACGAAATCGCAAGGGCTGATTCCAAGAAGTTTGAGTTGATATTTGGCAAAATGGAGATTACAAAACCAAGAGAACAAGTGGCTGATGCAAAAGCTCTGTTGGACATAATGAAATCCTTGGTAATGTCTATGAAGGGTCATGCTAACGGTGGAGTCACTCCTTCAGAATTTGTATCGCACATTCTTGAAGAATTTGGAGGACAGGGCAGATCAAGTACTAGCACAGAACGTTGCACCAAAAACTCAACAGCTTGGAATGATATTGGACTATCACTTGACGGAGGTCCAAGAGAAGTGAAAGCTAATACAGATAAAAATATGTTAACGATGTTTAACATCTTAAGGAAAAATAGTGTTGTTAAGCTTGAGAATTTGATTTTGAATAGGAACTCCTTTGCTCAAATAGTGGAGAATTTACTCGCTTTATCATTCATAGTCAAAGATGGGCGAGCTGAAATAAAAGTCAACGAGGCTGGATCACAACTAGTACTGTCACCCAGAAATTCCCCTCGTGCAAATGCAATTCGTGCTGGGGATATTGCTTTCGGTCACTTTATGTTCAGATTGGATTTTAAGGATTGGAAGGTGTATGAGGCTATGTGCTATAGAAGGTTACCTTTCTTTGTTTCCTATTCACTAATGATCGATTCTTTTGGGGTTGTGGAGGATCTAATGCCTTATAGGGAATAG 852 0.4131 MAKHQLNYSDCHSTAINTKLRRQLPPAHDDTDYRTHQSLRSRYLAFNNMINDERDEIARADSKKFELIFGKMEITKPREQVADAKALLDIMKSLVMSMKGHANGGVTPSEFVSHILEEFGGQGRSSTSTERCTKNSTAWNDIGLSLDGGPREVKANTDKNMLTMFNILRKNSVVKLENLILNRNSFAQIVENLLALSFIVKDGRAEIKVNEAGSQLVLSPRNSPRANAIRAGDIAFGHFMFRLDFKDWKVYEAMCYRRLPFFVSYSLMIDSFGVVEDLMPYRE* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1909 283 PANTHER NON-STRUCTURAL MAINTENANCE OF CHROMOSOMES ELEMENT 4 148 251 - -
Ahy20g1909 283 PANTHER NON-STRUCTURAL MAINTENANCE OF CHROMOSOMES ELEMENT 4 29 145 - -
Ahy20g1909 283 Pfam Nse4 C-terminal 174 250 IPR014854 -
Ahy20g1909 283 PANTHER UNCHARACTERIZED 148 251 IPR027786 GO:0005634|GO:0006281|GO:0030915
Ahy20g1909 283 PANTHER UNCHARACTERIZED 29 145 IPR027786 GO:0005634|GO:0006281|GO:0030915
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1909 Ahy-Chr20 106324839 106328984 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g1909 39 283 Non-SMC Element family AT1G51130 39.116 1.03e-61 198
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1909 K22825 - gmx:100781485 271.937