Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1895 ATGGAGTGTATTGGTAGGACTTCCAATGGAGAGAGCAGCGTAGCTCGGTTCCCATTGTCACCATCGAGCTCTTTGGTCATTCAGAAAGGAGATATCACCAAATGGTCCATCGATGGTTCCTCCGATGCAATAGTAAATCCTGCAAATGAGAGAATGCTTGGCGGTGGTGGTGCAGATGGCGCGATACATATGGCTGCTGGTCCTGAACTTGTTCAAGCATGTTATAGTGTTCCAGAGGTGAGGCCTGGAATTCGGTGCCCAACTGGGGAGGCAAGGATCACACCTGGTTTTAGATTGCCTGCTTCTCATGTTGTTCATACGGTTGGACCAATCTACAATTCTAATAGTAATCCTGCTGCTTCTCTTTCAAGCGCTTATAGTTTGAGGGTTGCTAAGGATAAAAACATTCAGTATATAGCATTCCCAGCTATATCATGTGGTGTCTTTGGATATCCTTATGATGAGGCTGCCACGGTAGCGATTTCTGTCGTCAGGGAGTTTCGAAATGAGTTTAAGGAGATCCACTTTGTTCTGTTCTTGCAAGATATTTATCAAGTCTGGGTAAATAAAGCAAATGATCTGATGAAAAATTAG 594 0.4411 MECIGRTSNGESSVARFPLSPSSSLVIQKGDITKWSIDGSSDAIVNPANERMLGGGGADGAIHMAAGPELVQACYSVPEVRPGIRCPTGEARITPGFRLPASHVVHTVGPIYNSNSNPAASLSSAYSLRVAKDKNIQYIAFPAISCGVFGYPYDEAATVAISVVREFRNEFKEIHFVLFLQDIYQVWVNKANDLMKN* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1895 197 Pfam Macro domain 45 160 IPR002589 -
Ahy20g1895 197 SMART YBR022w_8 24 160 IPR002589 -
Ahy20g1895 197 PANTHER MACRO DOMAIN-CONTAINING PROTEIN VPA0103-LIKE ISOFORM X1 14 196 - -
Ahy20g1895 197 CDD Macro_OAADPr_deacetylase 25 192 - -
Ahy20g1895 197 Gene3D Leucine Aminopeptidase, subunit E, domain 1 6 197 IPR043472 -
Ahy20g1895 197 ProSiteProfiles Macro domain profile. 12 195 IPR002589 -
Ahy20g1895 197 SUPERFAMILY Macro domain-like 22 192 IPR043472 -
Ahy20g1895 197 PANTHER GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED 14 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1895 Ahy-Chr20 105145297 105147128 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g1895 30 127 C2H2 Transcription Factor Family AT5G01310 36.036 1.72e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1895 K23518 - gmx:100811169 307.375