Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1890 ATGACTTTCAAGCGCAGGAACGGAGGAAGAAACAAGCATGGCCGTGGCCACGTAAAATTCATTCGCTGCTCCAATTGCGGCAAGTGCTGTCCCAAGGACAAATCAATCAAGAGGTTTCTTGTGAGGAACATTGTTGAGCAGGCTGCAGTTCGAGATGTTCAGGAAGCCTGTGTCTATGAGCAATACACTCTTCCGAAGCTGTATGTGAAGATGCAGTACTGTGTTTCGTGTGCTATTCACTCTCATGTTGTGAGGGTGCGTTCTCGCACTGATAGGAGGAACCGTGAGCCTCCGCAACGCTTTGCTAGACGCAGGGATGATGCACCAAGGCCCGGTCAACCTGGTCAAGCTCCTCGTCCTGCTGGAGTTGGAGCTGCTCCACGTGCTTGA 390 0.5179 MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKSIKRFLVRNIVEQAAVRDVQEACVYEQYTLPKLYVKMQYCVSCAIHSHVVRVRSRTDRRNREPPQRFARRRDDAPRPGQPGQAPRPAGVGAAPRA* 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1890 129 PANTHER 40S RIBOSOMAL PROTEIN S26 1 127 - -
Ahy20g1890 129 MobiDBLite consensus disorder prediction 86 129 - -
Ahy20g1890 129 Pfam Ribosomal protein S26e 1 106 IPR000892 GO:0003735|GO:0005840|GO:0006412
Ahy20g1890 129 PANTHER 40S RIBOSOMAL PROTEIN S26 1 127 IPR000892 GO:0003735|GO:0005840|GO:0006412
Ahy20g1890 129 Gene3D Ribosomal protein S26e 1 114 IPR038551 -
Ahy20g1890 129 ProSitePatterns Ribosomal protein S26e signature. 73 80 IPR000892 GO:0003735|GO:0005840|GO:0006412
Ahy20g1890 129 MobiDBLite consensus disorder prediction 89 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1890 Ahy-Chr20 104933873 104935141 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g1890 1 116 Cytoplasmic Ribosomal Protein Gene Family AT3G56340 84.483 6.18e-70 204
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g1890 20 104933873 104935141 Ahy10g1468 10 83342785 83344088 hybridization