Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1878 ATGATGCACGGTTTCGCTGTTAGGTTGGATGAAGTTAGATGCGATAGTGATGGTTGCATAGTTATGCGCCAAATTGTTTGTAATCGAGCGGGCTCAAGAAAGGAAGAGGTTGAAAAGGACGAAAGAATCAGGGACCACCAACCCCTAACTCGAAGTTGTTATCGTGCGAGAATTCGTGCAAGACTAGATAGAAAAATTCATAAATGGATGGTTGTTTCGTTCTACGAAGAGCACTCTCATGGATTAGTTGATCCACTCGACGTTAACATGATGCCTGAGTATCGCACATTCAGTTTCTCGGATAAAGCTCAGGCGAAGAATTTGCATGACATAGGCATTAGGACCTGTCACATCATGGGATACTTGGCTGCTCAAAAGGTGGATATGCAAATTTGTCATTCAACCAAAAAGATATGTACAACCTCATTACTCAACATAGGAAGGAAAAGGAACGTCTACAATAAACCACTTGTGATATTTTCTGGTAGCAATCATCATGGGCAAACCGTCATATTTGGATGTGGTCTTCTTGTTAATGAGGATATTGGTTCATACAAGTGGCTATTGAAAACTTTTTTAGAAGCAATCGGGAATAAACACCCTATGGCAGTTGTCACCGATGGAGATCTTTCAATGAGAGAAGCCATTAAACAAGTCTTTCCTTATGCAACACATCGACTATGTGCATGGCACTTACATAGGAATGCCTGCGAGAAGGTTAAGAACAGTGGATTTCTAAATGAATTTAAGAAATTGATTTATGCTAATGTGAGTGTTGAAGAGTTTGAGGTCAAGTGGGGAGATATGGTGGAGAAGTATAACTTATCAAGCAACTCTTGGGTCGATCAAACCTATGAGTTGAAGAATTTATGGGCTCTTGCATATTTGAGGAACCAATTTTTTGGGTGA 909 0.4015 MMHGFAVRLDEVRCDSDGCIVMRQIVCNRAGSRKEEVEKDERIRDHQPLTRSCYRARIRARLDRKIHKWMVVSFYEEHSHGLVDPLDVNMMPEYRTFSFSDKAQAKNLHDIGIRTCHIMGYLAAQKVDMQICHSTKKICTTSLLNIGRKRNVYNKPLVIFSGSNHHGQTVIFGCGLLVNEDIGSYKWLLKTFLEAIGNKHPMAVVTDGDLSMREAIKQVFPYATHRLCAWHLHRNACEKVKNSGFLNEFKKLIYANVSVEEFEVKWGDMVEKYNLSSNSWVDQTYELKNLWALAYLRNQFFG* 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1878 302 Pfam FAR1 DNA-binding domain 3 83 IPR004330 -
Ahy20g1878 302 PANTHER OS02G0262500 PROTEIN 3 124 - -
Ahy20g1878 302 PANTHER OS02G0262500 PROTEIN 150 299 - -
Ahy20g1878 302 Pfam MULE transposase domain 150 235 IPR018289 -
Ahy20g1878 302 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 3 124 IPR031052 GO:0006355
Ahy20g1878 302 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 150 299 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1878 Ahy-Chr20 104276399 104277498 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy20g1878 MULE 7.80E-22 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1878 - - ahf:112786079 630.557