Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1873 ATGATTTCGTTCTCGCACCACCGTCGAACTCAATCGGAGCTACATGTCCGAATCCCCGACGAATTTGATCTCGATCTCGATATGGATGTGGATTTGGATGTTGATTCCTTTGATTTCAAAAATTCCATTCCTAACAACGAAACCGTCATCTCCTCCTCCTCATCTTCCGTAGCAGCTGAATCCCTCTCTAAGCCAGTATCCGACCACCAACTACCTCCGCTATCACCTGCCTCTGCACCCGCGCCCATTGTAGATACCAATAAAACCACCGTGAGGCCTGGTCACCGGCGTAGCAACTCGGCGGATGACGCCTCTTCTTCTTCGTTGTTGTTGGAAGGCATTGAGGCCAAGAAGGCCATGTCCCCTGACAAGCTTGCTGAATTATGGACCGTTGATCCCAAGCGAGCCAAGAGGATTTTGGCCAACCGTAAGTCGGCGGCCCGCTCAAAGGAGAGGAGAGCTTGTTATGTGGTGGAGCTTGAGAGAAAAATTCAGGTTCTTCAAACAGAAGCAACTACTCTTTCAGCCCAATTAAATCTTTTCCAGAGAGATACAACTGGTTTGACTACTGAAAATACTGAACTTAGGCTACGCTTACAAGCTATGGAGCAACAAGCTAAGTTATGTGATGCTCTGAATGAAGCACTGAAAAAAGAAGTTGATAGACTCAAGATTGCTACTGGAGAGATGGTAACTCGTCCCAATTCGAATAGTTTGGCAATGCAACGGGCTTCATATTCTCAAGCTCCTTTCTTCTCGCTTCAACTGCAACATTTTGCAAGCGAACTTCACACCATGCAAATGCCTCCTTTGCATCCACTATTGCCTAATATGTCTTCCCCTCAACCGCTGATTGATGTAGCTACTCCATACAATTTGTCAAACATGTTGCCAAGTGATCCTGTTCCTGTTGGCCAATTTCAGGTGCTAGACATAAGTCATCCGATCCCTCATGTTCTGATTCATGATGGTCCCTCCATTTCTGTTAATAAAATCAACAATGCCTTTTGA 1011 0.459 MISFSHHRRTQSELHVRIPDEFDLDLDMDVDLDVDSFDFKNSIPNNETVISSSSSSVAAESLSKPVSDHQLPPLSPASAPAPIVDTNKTTVRPGHRRSNSADDASSSSLLLEGIEAKKAMSPDKLAELWTVDPKRAKRILANRKSAARSKERRACYVVELERKIQVLQTEATTLSAQLNLFQRDTTGLTTENTELRLRLQAMEQQAKLCDALNEALKKEVDRLKIATGEMVTRPNSNSLAMQRASYSQAPFFSLQLQHFASELHTMQMPPLHPLLPNMSSPQPLIDVATPYNLSNMLPSDPVPVGQFQVLDISHPIPHVLIHDGPSISVNKINNAF* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1873 336 PANTHER BZIP TRANSCRIPTION FACTOR 18 3 332 - -
Ahy20g1873 336 CDD bZIP_plant_RF2 135 184 IPR044759 GO:0003700|GO:0006355
Ahy20g1873 336 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 132 195 IPR004827 GO:0003700|GO:0006355
Ahy20g1873 336 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 3 332 - -
Ahy20g1873 336 SMART brlzneu 130 194 IPR004827 GO:0003700|GO:0006355
Ahy20g1873 336 MobiDBLite consensus disorder prediction 61 107 - -
Ahy20g1873 336 Gene3D - 133 185 - -
Ahy20g1873 336 SUPERFAMILY Leucine zipper domain 134 188 IPR046347 GO:0003700|GO:0006355
Ahy20g1873 336 Coils Coil 199 219 - -
Ahy20g1873 336 Coils Coil 157 177 - -
Ahy20g1873 336 Pfam bZIP transcription factor 134 188 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1873 Ahy-Chr20 103842319 103845089 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g1873 6 230 bZIP Transcription Factor Family AT2G40620 56.223 1.03e-70 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Ahy20g1873 bZIP_1 1.10E-07 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1873 - - adu:107470204 543.888
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g1873 20 103842319 103845089 Ahy10g1460 10 82675494 82678444 hybridization