Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1835 ATGCTGCTTTTACACTCATTGATTTCAAGCTATTTCATTGAGTTGGCAAGGATAAAAGCTGCAGGAGGAAGGGTCATACATTGGCAAGGGTACCGAGTTCTTGGCATTTTGGCAATGTCAAGATCCATAGGTGGTAGGTACTTGAAACCATGTATTATTCCAGAATCAGAAGTGAAGTTTGTGCAATGGGAGAAATATGACGAGTGCCTTTTTCTAGCTAGTGATGGTTTATGGGATGTGGTGACAAATGAAGAAGCTTGTGAAGTTGCACAGAAGAGGATCCTTCTTTGGCACAAGAAGTATGTCGAGATTGCATCAATGACCGAACAAGTTGAAGAAGGAGTTGACCCTGCAGCTCACTCTGCTGCAGAGTATCTCTCTAGACTTGCCCACCAAAGGGGAAGCAAAGATAACATCTCTGTAATTGTGATAGACTTGAAGGCTCAAAGAAAAATTAAGAGAAAAGCATAA 471 0.4161 MLLLHSLISSYFIELARIKAAGGRVIHWQGYRVLGILAMSRSIGGRYLKPCIIPESEVKFVQWEKYDECLFLASDGLWDVVTNEEACEVAQKRILLWHKKYVEIASMTEQVEEGVDPAAHSAAEYLSRLAHQRGSKDNISVIVIDLKAQRKIKRKA* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1835 156 ProSiteProfiles PPM-type phosphatase domain profile. 1 146 IPR001932 -
Ahy20g1835 156 PANTHER ALPHABET, ISOFORM E-RELATED 14 155 - -
Ahy20g1835 156 PANTHER PROTEIN PHOSPHATASE 2C ABI2-LIKE PROTEIN 14 155 - -
Ahy20g1835 156 Gene3D - 10 156 IPR036457 -
Ahy20g1835 156 CDD PP2Cc 14 146 IPR001932 -
Ahy20g1835 156 SUPERFAMILY PP2C-like 13 147 IPR036457 -
Ahy20g1835 156 Pfam Protein phosphatase 2C 14 139 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1835 Ahy-Chr20 100600260 100601141 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g1835 14 155 PP2C-type Phosphatase Gene Family AT4G26080 65.753 1.83e-61 193
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1835 K14497 - aip:107620809 312.768