Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1825 ATGGAGTGCGATATGTTTGAACTGATGGGTTGTGTTCCATTTGCCGTCGGTAATGAGAATTCATCAAATCCACATGAAAACGTACCTGACCATTTCGTCGTCGACGTGAGCAATCGAATAAGCTATGCCATGCAACTGTTGGATGTTATTGAGGTTGGAAGTGAAGAGAGGGATCTTGGTTACGAGTTACTGGATCATGGTTGCCTTCAAGAAGACGAAATACCAAGAGTTGGAATGCGGTTTGCGCAGTTGCAGATGGCTCATGAATTCTATGTTACTTACGCAAAGAAAATAGGATTTGTAACTAAGATAAGGATGGCAACATGTGACAAGAACATAAAGAAACCCGTTAACCAAGCTATCCACTGTAATCGAGACGGGTTTTGCGGGTCTCGTGTCAAAGCACCAACGCAGAAGAACACGATTTCAGCTGCTGGGTGCAAGGCAAGGATATATGTAAAGTTTGATAAGGACATGCAAGAGTGGGTTTTGTTCAAGGTTGAGTTGAGGCACTCACACCCATGTTCAGCGAGAAAGGCGGTGTACTACCATGAGTTTAGGGACCTGACCATGCATGCGAAGTGTGTGACCGAGGATAATGATAAGGCTGGGATTCGACCAAACAAGACATCCCTAGCTTTAGCAAATGAGGATAGGGGCCCGTCTAACCTGGGATTCTCAGAAAAGGAATTAAGAAACTATATTACAGCAAGGCCCCAAACCAGCAACGTGAATGCGGATGTGAGGGAGATGATGAACTACTTCATGAGAATGAAGGACATCAATCCTAACTTCTTCTACGCGGTGAAGTTGGACGAGGAGTGTAAATTTAGGAGTGCAGTATGGGTAGATGCAAGGTGTAGGGTGTCGTATGAATATTTCGGAGACATCATGTCAGTTGGTAGCACCTATAGTACAAACCGGCATGGATTACCATTTGTGTCGTTCGTCGGTGTCAACCACCATAAAATACGTTACCCGATACACGCCACTGGTGGTGCATCTGGCACATTACGAAGAAGTTACTGCACAAGCTTGGAGGTTATCGCTGTAACACCTTCACTATCAGAAGTCATGCTTCCGGCTGCGCTACTCTGA 1098 0.4526 MECDMFELMGCVPFAVGNENSSNPHENVPDHFVVDVSNRISYAMQLLDVIEVGSEERDLGYELLDHGCLQEDEIPRVGMRFAQLQMAHEFYVTYAKKIGFVTKIRMATCDKNIKKPVNQAIHCNRDGFCGSRVKAPTQKNTISAAGCKARIYVKFDKDMQEWVLFKVELRHSHPCSARKAVYYHEFRDLTMHAKCVTEDNDKAGIRPNKTSLALANEDRGPSNLGFSEKELRNYITARPQTSNVNADVREMMNYFMRMKDINPNFFYAVKLDEECKFRSAVWVDARCRVSYEYFGDIMSVGSTYSTNRHGLPFVSFVGVNHHKIRYPIHATGGASGTLRRSYCTSLEVIAVTPSLSEVMLPAALL* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1825 365 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 73 322 - -
Ahy20g1825 365 Pfam FAR1 DNA-binding domain 89 175 IPR004330 -
Ahy20g1825 365 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 73 322 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1825 Ahy-Chr20 99761475 99763697 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy20g1825 FAR1 3.20E-14 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1825 - - ahf:112733025 480.33