Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1821 ATGGCAGAATTGCAAGAAGAGCGTGTTTCAAGCAAGGGTCCTCCTTTATGCACATCACCTACCCGAAATTCATTAATGGAGGTAGATATAGTTGAACCGTTAGTATGTGTAGCCTCTAACGTTTCAGAAAATTTATCATACGAACAAGAAAACTTACCCGGCGATGTCGCTGGCCACGGTCACAAGTCGAACAAGGTCATGCAGTTGTCGGATGTTACGGATGTTGGAAGTGAAAATATGGAGCTTGGTGATGAGTTACCAGATCATGGTTGCCTACAAGAAGACGAGATATCAAGAGTTGGAATGCGGTTTGCTCAGTTACAGATGGCTCATGACTTTTATGTTACATATGCAAAGAAAGCTGGATTTGCAACTAAGATAAGGACAACAACATTTGACAAGAACACCAAGGCTCCCGTTAACCAAGTTATACACTGTAATCACGACAGGATCCGCGAGTCTTGTGTTAAATCACCAATGCAGAAGAATACGATTTCAGCTGCTGGGTGCAAGGCAAGGATATATGTAAAGTTTGATAAAGATTTGCAAGACTGGGTTTTGTTCAAGGTTGACTTGACGTACTCACATCCTTGTTCACCGAGAAAGGCAGTGCACTACCATGAGTATAGGAAGCTGACCATGCATACGAAGTACGTGATCGAAGATAATGATGAGGCTGGGATTCGACCAAATAAGACATTCCTTGCTTTGTCAAATGAGGCTAGTGGCCCCTCTAACTTGGGATTCTTAGAGAAGGATTTAAGAAACTATATAACAGCAAGGCTCCAAACTAGCAACGTGAATGCAGATGTCAGGGAGATGATGAGCTACTTCATGAGAATGAAGGACATCAATCCAAACTTCTTTTACGCGGTGAAGTTGGACGAGGAGTGTAAATTTAAGAGCGCAGTATGGATTGATGCAAGGTGTAGGGCGTCGTATGAATACTATGGAGACGTCGTGTCAGTTGATAGCACGTACAGTACAAATAGGCATGGATTACCGTTTATGTCGTTTGTTGGGGTCAACCACCATGGTAAGTCGACCCTCCTCGGTTGTGCTTTGTTGGGTAATGAGAAAATCGCAAGTTATGAGTGGGTTTTTAGCCAATGGGTGAAGTGCATGGGAACTGCTCCACAGTGTATCATAACTGATCAATGTCGATCCATTTACTGTGGGATCAAAAATACTTTACCCGACACACGCCACCGGTGGTGCATCTAG 1224 0.4346 MAELQEERVSSKGPPLCTSPTRNSLMEVDIVEPLVCVASNVSENLSYEQENLPGDVAGHGHKSNKVMQLSDVTDVGSENMELGDELPDHGCLQEDEISRVGMRFAQLQMAHDFYVTYAKKAGFATKIRTTTFDKNTKAPVNQVIHCNHDRIRESCVKSPMQKNTISAAGCKARIYVKFDKDLQDWVLFKVDLTYSHPCSPRKAVHYHEYRKLTMHTKYVIEDNDEAGIRPNKTFLALSNEASGPSNLGFLEKDLRNYITARLQTSNVNADVREMMSYFMRMKDINPNFFYAVKLDEECKFKSAVWIDARCRASYEYYGDVVSVDSTYSTNRHGLPFMSFVGVNHHGKSTLLGCALLGNEKIASYEWVFSQWVKCMGTAPQCIITDQCRSIYCGIKNTLPDTRHRWCI* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1821 407 Pfam MULE transposase domain 320 407 IPR018289 -
Ahy20g1821 407 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 63 406 IPR031052 GO:0006355
Ahy20g1821 407 PANTHER PROTEIN FAR1-RELATED SEQUENCE 8 63 406 - -
Ahy20g1821 407 MobiDBLite consensus disorder prediction 1 21 - -
Ahy20g1821 407 Pfam FAR1 DNA-binding domain 112 199 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1821 Ahy-Chr20 99635938 99638514 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy20g1821 FAR1 6.30E-10 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1821 - - ahf:112733025 737.258