Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1796 ATGGGTTCAAGCGGTGAGACACAGATAACGCCAACTGTGGTGTCCGATGAGGAGGCGAACCTCTTTGGGATGCAGCTAGCAAGTGCCTCTGTTCTCCCAATGGTTCTGAAGGCAGCAATTGAGCTTGATCTGTTGGAGATCATTGCCAAAGCTGGCCCCGGAGTTCACCTTTCTCCGGCTGACATTGCGGCGAAGCTTCCAACCACCAACCCCGATGCTCCGGTGATGCTGGACCGCATGTTGAGGCTCTTGGCTTGCTACAACATCTTCACCCACTCCCTCCGTACCCTTCCTGATGGCAAGGTTGAGAGGCTCTATGGTCTTGCACCTGTTGCTAAGTTCTTGGTCAAGAATGAAGATGGCGTCTCTCTTTCTGCTCTTAACCTCATGAATCAGGACAAAGTTCTCATGGAAAGCTGGTACTACTTGAAAGATACAGTGCTTGAAGGAGGGATTCCATTTAACAAGGCTTATGGAATGACAGCATTTGAATACCATGGCACAGATCCAAGGTTCAACAAGGTTTTCAACAAAGGGATGAACGATCATACTACAATAACAATGAAGAAAATCCTTGAGATCTACACAGGCTTTGAAGGTCTTAAATCTCTAGTTGATGTTGGAGGTGGTGTTGGAGCCGTAATGAACATGATTGTCACCAAGTATCCCCATATAAAGGGCATTAATTTTGATTTGCCCCATGTTATTGAAGATGCACCATCTTATCCGGGAGTGGAGCATGTTGGTGGCGACATGTTTGTCAGTGTTCCAAAAGCAGATGCTGTTTTTATGAAGTGGATTTGCCATGACTGGAGTGATGATCACTGCATAAAGTTTTTGAAGAACTGCTATGATGCACTCCCCTACAACGGGAAGGTGATTGTGGCCGAATGCATTCTTCCGGTGGCGCCGGATTCTAGCTTGGCCACGAAGGGCGTGGTCCACATCGACGTGATCATGTTGGCTCACAACCCAGGTGGGAAAGAGAGAACAGAGAAAGAGTTTGAGGCCCTTGCCAAGGCTGCTGGATTCCAAGGTTTCCGAGTCCTCTGCTGCGCTTTCAACACCTATATCATGGAATTCCTCAAGAAGCCTTAA 1098 0.4772 MGSSGETQITPTVVSDEEANLFGMQLASASVLPMVLKAAIELDLLEIIAKAGPGVHLSPADIAAKLPTTNPDAPVMLDRMLRLLACYNIFTHSLRTLPDGKVERLYGLAPVAKFLVKNEDGVSLSALNLMNQDKVLMESWYYLKDTVLEGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMNDHTTITMKKILEIYTGFEGLKSLVDVGGGVGAVMNMIVTKYPHIKGINFDLPHVIEDAPSYPGVEHVGGDMFVSVPKADAVFMKWICHDWSDDHCIKFLKNCYDALPYNGKVIVAECILPVAPDSSLATKGVVHIDVIMLAHNPGGKERTEKEFEALAKAAGFQGFRVLCCAFNTYIMEFLKKP* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1796 365 SUPERFAMILY "Winged helix" DNA-binding domain 16 119 IPR036390 -
Ahy20g1796 365 Pfam O-methyltransferase domain 140 345 IPR001077 GO:0008171
Ahy20g1796 365 PANTHER O-METHYLTRANSFERASE 1 364 IPR016461 GO:0008168
Ahy20g1796 365 Gene3D Vaccinia Virus protein VP39 116 363 IPR029063 -
Ahy20g1796 365 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 120 361 IPR029063 -
Ahy20g1796 365 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 24 363 IPR016461 GO:0008168
Ahy20g1796 365 PANTHER BNAA03G48770D PROTEIN 1 364 - -
Ahy20g1796 365 PIRSF O-mtase 1 363 IPR016461 GO:0008168
Ahy20g1796 365 Pfam Dimerisation domain 34 85 IPR012967 GO:0046983
Ahy20g1796 365 Gene3D - 1 115 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1796 Ahy-Chr20 97367063 97373076 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g1796 1 364 Monolignol Biosynthesis Gene Families AT5G54160 74.451 0.0 580
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1796 K13066 - gmx:100780100 681.019
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g1796 20 97367063 97373076 Ahy10g1394 10 77350809 77356957 hybridization