Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1790 ATGGATAAGAGCTTGAAGGATATAGAAGATGAAACTACTACTCTTAAAGAGATGCAAGCCAAGGTCAAGAAGGAGATGGGATCTGTCCAGGATCTTGAAACTGCATCTACTAGTCAGGTCAACAGAGAGGAGATAGATTCTCGTTCAATTTTTGTAGGCAATATATCAAGTATTAGAAAATGGAATCTTGTTTTCGCTGCAAGGCCTGGTTATGGCCACCTTGGAACAAAATGTGTTGTCAAAGCTAACCACTTCCTTGCAGATATTTCAGCATCTGACCTCGGCCATTACACTGTTAAGATAATACCTGAAGTGAGGTGTCGTAAAACAAGCAAAGCTATAATAGCTGAGTTGGTGAGGGTTCATAAGAACACTGAGTTGGGGATGAGGCTTCCTGTTTATGATGGAGGAAGGAATCTTTACACTGCTGCCATGCTTCCTTTCACATACAAAGAGTTCACTATATTATTGATTGAAGATGATGAGAGTATTGGTACTACCAGGGAAAGAGAGTTTAAGGTGGTAATCAAATTTGCTGCTCATGTTAGCATGCATCAATTACGTGAGCTTCTCAGTGGAAAACAAGTGGACACACCACAAGAAGCACTTATTGTTATTGATATTGTTCTGAGGGAGCTTGCAGCACAGAGTTACGTGTCCGATTGGGAGGTTTCTGTATTACAACTCAGTTGTGCCAAGGCTGATTCTACTCCATCGAAAAAGCCAAAGCCAAAGCTATCACCAGCACAAGCTCTTGGCACCCCAGCCAAGAAAAAGTCTCTAGCTATGATGTCTCCTTCAAGCAGCATCAACAGTTCTGGTGGAGAAGATACTAAAGGTTCAACCAAATGTTAA 855 0.4152 MDKSLKDIEDETTTLKEMQAKVKKEMGSVQDLETASTSQVNREEIDSRSIFVGNISSIRKWNLVFAARPGYGHLGTKCVVKANHFLADISASDLGHYTVKIIPEVRCRKTSKAIIAELVRVHKNTELGMRLPVYDGGRNLYTAAMLPFTYKEFTILLIEDDESIGTTREREFKVVIKFAAHVSMHQLRELLSGKQVDTPQEALIVIDIVLRELAAQSYVSDWEVSVLQLSCAKADSTPSKKPKPKLSPAQALGTPAKKKSLAMMSPSSSINSSGGEDTKGSTKC* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1790 284 Pfam N-terminal domain of argonaute 76 210 IPR032474 -
Ahy20g1790 284 PANTHER PROTEIN ARGONAUTE 10 28 219 - -
Ahy20g1790 284 Coils Coil 1 35 - -
Ahy20g1790 284 MobiDBLite consensus disorder prediction 234 284 - -
Ahy20g1790 284 MobiDBLite consensus disorder prediction 261 284 - -
Ahy20g1790 284 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 28 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1790 Ahy-Chr20 96404218 96406300 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g1790 58 218 Eukaryotic Initiation Factors Gene Family AT5G43810 55.215 1.31e-56 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1790 K11593 - ahf:112784635 514.227