Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1768 ATGTCCACAAACAAGCATGATGTTAAGAATGATTCAGATGATGATTTGGGTGATGATTTCGATTATGAACTGACTCCACAAGATGATGTTGATTCGTTGAATTTTACTAGCAAGAGTGAACAAGATTGTGGTGTAAAAAGAATAACAAATTTAATGGTAGAGGATATTTGGAACTTGGAGTTTAGGACAGAGGATGATGCTTGCCAATTTTATAATGCTTATGCTTGTTGGCATGGCTTCGTAATGAGGAAGGATGACGTCGTGAGGGCTAAGGAAGGTAAAATCATTTGCAGAAAACTTGTCTGCAATAAGGAGGGTTGGAGGAACATGAGGTATATTGATTTGGATAATAGATCAAGGGAGGCAAGGTCACTCACGCGAACCAAGTGTCCAGCTCGGCTCAAGGTAAAGGTTGACTACGGCTGTGGTAGATTGAAGGTATCATGTTTTGTGGAATCTCACAACCACGATTTGACGCCCCCCCAATTTGCGCATCTTGTTCCAGCCAATTGTCGTCTCACTGTTACTGATAAAGTTCAAGTGAAAAATCTTCATAATTTTGGTGTCAAGACGTGCCATATTATGGGATATATTGCGTTCCAAAAGGGTGGATATCATCATGCTGGCTTCACACGCAAAGATTTGTACAACCACATTGATCGGTATTATAGATCAAAAGTAAAGAACGGGGATGCCAATGCGGCAATAAACTATTTGATTGAGAAGGCAAACAACGATCCGCTGTTCTTTGAAAAGTATACGTTCACCAGTGACCAAAGGCTGGAGCATATATTTTGGGCAAATGGGCAATTAATTGTCGACTATCACTGCTTTGGAGATATTGTTGCCTTTGATTCAACGTACAAGAAGAATAAATACAACAAACCTTTGGTCATTTTCTCTGGATGCAATAATCATGGGCAGACTGTTATTTTCGGCTCCGGTCTACTTTCAGACGAGACGACAGACACGTATAAGTGGTTCTTGAAAACGTTTGCCAAAGCGATGGGTGGGAAGCGTCCTAAAGCAATAATAACCGATGGAGATCTTGCAATGCAAGATGCAATCAAGTTCTTCCCGATGCACCCATCGGTTATGCGGGTGGCATCTTCAGAGAAATGCATGTGA 1128 0.4122 MSTNKHDVKNDSDDDLGDDFDYELTPQDDVDSLNFTSKSEQDCGVKRITNLMVEDIWNLEFRTEDDACQFYNAYACWHGFVMRKDDVVRAKEGKIICRKLVCNKEGWRNMRYIDLDNRSREARSLTRTKCPARLKVKVDYGCGRLKVSCFVESHNHDLTPPQFAHLVPANCRLTVTDKVQVKNLHNFGVKTCHIMGYIAFQKGGYHHAGFTRKDLYNHIDRYYRSKVKNGDANAAINYLIEKANNDPLFFEKYTFTSDQRLEHIFWANGQLIVDYHCFGDIVAFDSTYKKNKYNKPLVIFSGCNNHGQTVIFGSGLLSDETTDTYKWFLKTFAKAMGGKRPKAIITDGDLAMQDAIKFFPMHPSVMRVASSEKCM* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1768 375 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 55 358 IPR031052 GO:0006355
Ahy20g1768 375 Pfam FAR1 DNA-binding domain 69 159 IPR004330 -
Ahy20g1768 375 Pfam MULE transposase domain 281 357 IPR018289 -
Ahy20g1768 375 PANTHER OS02G0262500 PROTEIN 55 358 - -
Ahy20g1768 375 MobiDBLite consensus disorder prediction 1 21 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1768 Ahy-Chr20 93865084 93866211 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy20g1768 FAR1 1.40E-18 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1768 - - adu:107460934 630.172