Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1751 ATGACAACAATGTTGTTGCTCCTTTGTTTCCTACTCGTTCATATTAGTGGCATTGCATGCAACTTTGCCACAGACAAAGAAGCCCTTCTTTCATTCAAATCCAAAGTCATTGACCCCCAAAACACACTCTCAACTTGGACGACAGACTCCCACCATTGCGAATGGTACGGTGTGAAGTGCTCCAATATTGGAAGAAGGGTCAAATCTCTGAATCTAAGAGGACTGAGCCTCTCTGGAAAACTACCCTCTCAACTCTCGAAACTCACTTACCTTCACTCACTTGACCTCTCTGCCAACTCATTCCATGGCCAAATTCCACCAGACATTTCTTACCTTTCCCTTCTCAATATCCTTTTCTTATCTTCCAACAATCTCAGCGGCTCAATTCCACCGCAGTTGGGACAACTCAAACGTTTACATAGCTTGGATTTGTCTGTGAATAATCTCACGGGTGAAATCCCTTCAACGTTGTGCAATCTCTCATCTCTTAAGTATCTTGCCATTGCAAGGAATCACTTGTCAGGTGAAATTCCAACTCAAATAGGCAACCTTGGCAATCTTTCGCAGCTTCAGCTATCGGAAAATGATCTCAGCGGCCAACTTCCCTCTTCACTCTTCCACATCTCTCAGTTAACATACTTGTCTGTCACATGCAACAATCTCTCAGGAAAGTTGCCAGCTTCTTTAGGATTTTCACTTCCAAATATAAAGAATCTCTCCCTTGCAACAAATAGGTTTGAAGGGCCGATTCCTCATTCCATATCCAATTCTTCACAACTTGAGTACCTTGATCTTTCTAACAACTTCTTTCATGGGAACTTGCCTTTCTTCAACAACTTTGAAAATCTTGTATACCTTACTCTTGGAAACAATTCTCTCTCTTCCACCACTTCCTTGAATTCTCAGTTCTTTGATTCCCTCACAAACTCAACTAAGCTTCAAGTTCTCATACTCTATCACAACAATTTGGCTGGAGAACTTCCAAGTTCTATTCAGAATCTGTCTACCAAACTATATTGGTTCTGTGTAGCTGATAATTTTCTCACTGGTAAGATTCCTCAAGGATGGAAGGAATTTCAACATCTTGAGTTTTTATCTTTTGAATCCAACCATTTCTCTGGTGAGTTGCCATCAGAGATCGGATCTCTAAGTAATCTGGTGGAACTTTCAATAGATGATAATGTATTGTCAGGGGAAATACCAGATATTTTTGGGAATCTCACTTCTCTGTCTACTATTTCAATGGCATACAACCAATTCACAGGTAGAATTCACCAAAGTATAGGACAATGCAAGTCACTAAACTTTCTTTATATTGGAATGAATAAGCTTGGTGGAACTATACCAAAGGAGATTTTCGACCTTCCTGGCTTAGTACACTTATCCGTTGGAGGAAACTCATTGCATGGATCAATTTCATCTGGCGTGAGTACCATGAAACAGCTTGAGATATTTGATGTTTCCAACAACCATTTTTCAGGTTCCATTCCTTCTGAAATAGGAGAATGTTCTACCTTGAAGATACTTGAGATGGGGAGAAACAATTTCAGTGGCTTAATCCCAACTCTAGGGAGTTTAGCATCCTTGGAGACTTTGGATCTTTCTTCAAACAACCTCGGTGGCATTATTCCTGAAAGTTTGGAGAAGCTGCAGGATCTAAATACATTAAATTTGTCTTTCAACCATTTGGAAGGACAAGTTCCCATGAAAGGTGTTTTCATGAACCTTAGCCAGGTTGATCTCCGTGCAAATGACATGCTTTGTAGCATTGACATGGAAATTGCAAGGAAGTTGGGGATACTTTTATGCCATGTGGGCAAAAAGAAGAGACATATTTTACTCCCTATCATTCTTGCAGTTATAGGTGCTACTATTCTTCTCATTTCAATGCTTTCTCTGTTGTGGATAGTAATATTCAAAAGGAGGAGAAGTAGAGAGAGTAATGTCAATTCAACATCTGCTCTAGTGATGGGATTACCTCAAAGTATGTCATACAATGAGATACGGATTGCCACAGAGAATTTCGCAGCTGAAAATTTGATCGGAAAAGGAGCATTTGGATCTGTTTACAAGGGCGAGTTCACCCTAGACAGCGGTGAAACCACCACCTTTGCTGTTAAAGTGTTGGACATGCAACAAAGCAAGGCTTGTAAGAGTTTCAATGCAGAATGTGAAGCTTTGAAGAATGCAAGGCACCGGAACCTAGTGAAGGTTATTACTTCTTGTTCCAGTCTTGATTCTAAGGGAGAGGATTTCAAGGCACTTGTTATGCAGTTTATGGCAAATGGAAACTTGGACATGTGGTTACACCCAAACGATGATGAGTCAGGATCATCTCTAACTTTGTTGCAAAGATTGAACATTGCCATTGATGTTGCTTCAGCTATGGACTATTTACACCATGATTGTGACCCACCAATAGTTCACTGTGATATGAAGCCAATGAATGTTCTTCTAGATGACGACATGGTTGCACATGTTGGAGACTTTGGATTGGCAAGGCTTCTTTCTGAAAATGCAACACACAAAGAAAGTGGCACACTTGGACTTAAGGGATCAATAGGCTACATTGCACCAGAATACGGGGAAGGAGGGAAGGTTTCAACAAGTGGAGATGTGTATAGCTTCGGGATCTTAGTGCTGGAGATGTTCATAGGAAAAAGGCCAACTGATGAAATGTTCAAAGAAGGGTTATGCCTAAACAAATTTGCCTCAGCAATGGATGATCATGAGAATAAAGTAATAATGAAGGTTGGTGATGGAAGGTTTCTTACAAATGAGAGTAGTGAATATTCAACACAAAGCTATAGCATTGAGGTTGATAACCATAGTGTGCATCATTGGAGGCGCAAAGCAGAAGAATGTGTAGATGCAGTGATAAGAGTAGGGTTGTCATGTACAGCTCAACAACCTAAAGATCGTTGCACCATGAGAGACACCTCAATTAAGTTGCAAGCAATTAGAAAGTCTATGTTTGCCTTGTGA 2985 0.404 MTTMLLLLCFLLVHISGIACNFATDKEALLSFKSKVIDPQNTLSTWTTDSHHCEWYGVKCSNIGRRVKSLNLRGLSLSGKLPSQLSKLTYLHSLDLSANSFHGQIPPDISYLSLLNILFLSSNNLSGSIPPQLGQLKRLHSLDLSVNNLTGEIPSTLCNLSSLKYLAIARNHLSGEIPTQIGNLGNLSQLQLSENDLSGQLPSSLFHISQLTYLSVTCNNLSGKLPASLGFSLPNIKNLSLATNRFEGPIPHSISNSSQLEYLDLSNNFFHGNLPFFNNFENLVYLTLGNNSLSSTTSLNSQFFDSLTNSTKLQVLILYHNNLAGELPSSIQNLSTKLYWFCVADNFLTGKIPQGWKEFQHLEFLSFESNHFSGELPSEIGSLSNLVELSIDDNVLSGEIPDIFGNLTSLSTISMAYNQFTGRIHQSIGQCKSLNFLYIGMNKLGGTIPKEIFDLPGLVHLSVGGNSLHGSISSGVSTMKQLEIFDVSNNHFSGSIPSEIGECSTLKILEMGRNNFSGLIPTLGSLASLETLDLSSNNLGGIIPESLEKLQDLNTLNLSFNHLEGQVPMKGVFMNLSQVDLRANDMLCSIDMEIARKLGILLCHVGKKKRHILLPIILAVIGATILLISMLSLLWIVIFKRRRSRESNVNSTSALVMGLPQSMSYNEIRIATENFAAENLIGKGAFGSVYKGEFTLDSGETTTFAVKVLDMQQSKACKSFNAECEALKNARHRNLVKVITSCSSLDSKGEDFKALVMQFMANGNLDMWLHPNDDESGSSLTLLQRLNIAIDVASAMDYLHHDCDPPIVHCDMKPMNVLLDDDMVAHVGDFGLARLLSENATHKESGTLGLKGSIGYIAPEYGEGGKVSTSGDVYSFGILVLEMFIGKRPTDEMFKEGLCLNKFASAMDDHENKVIMKVGDGRFLTNESSEYSTQSYSIEVDNHSVHHWRRKAEECVDAVIRVGLSCTAQQPKDRCTMRDTSIKLQAIRKSMFAL* 995
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1751 994 SMART LRR_typ_2 280 306 IPR003591 -
Ahy20g1751 994 SMART LRR_typ_2 112 135 IPR003591 -
Ahy20g1751 994 SMART LRR_typ_2 479 503 IPR003591 -
Ahy20g1751 994 SMART LRR_typ_2 383 406 IPR003591 -
Ahy20g1751 994 SMART LRR_typ_2 550 575 IPR003591 -
Ahy20g1751 994 SMART LRR_typ_2 407 431 IPR003591 -
Ahy20g1751 994 SMART LRR_typ_2 184 208 IPR003591 -
Ahy20g1751 994 SMART LRR_typ_2 136 160 IPR003591 -
Ahy20g1751 994 SMART LRR_typ_2 526 549 IPR003591 -
Ahy20g1751 994 Gene3D Ribonuclease Inhibitor 180 275 IPR032675 -
Ahy20g1751 994 Gene3D Transferase(Phosphotransferase) domain 1 760 992 - -
Ahy20g1751 994 ProSiteProfiles Leucine-rich repeat profile. 528 549 IPR001611 GO:0005515
Ahy20g1751 994 Pfam Leucine rich repeat N-terminal domain 24 61 IPR013210 -
Ahy20g1751 994 Gene3D Ribonuclease Inhibitor 276 596 IPR032675 -
Ahy20g1751 994 SMART serkin_6 675 992 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g1751 994 Pfam Leucine Rich Repeat 138 160 IPR001611 GO:0005515
Ahy20g1751 994 SUPERFAMILY L domain-like 337 592 - -
Ahy20g1751 994 ProSitePatterns Protein kinases ATP-binding region signature. 681 707 IPR017441 GO:0005524
Ahy20g1751 994 PANTHER OS04G0122200 PROTEIN 16 990 - -
Ahy20g1751 994 ProSitePatterns Serine/Threonine protein kinases active-site signature. 807 819 IPR008271 GO:0004672|GO:0006468
Ahy20g1751 994 ProSiteProfiles Protein kinase domain profile. 675 992 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g1751 994 SMART LRR_sd22_2 526 555 - -
Ahy20g1751 994 SMART LRR_sd22_2 280 301 - -
Ahy20g1751 994 SMART LRR_sd22_2 310 336 - -
Ahy20g1751 994 SMART LRR_sd22_2 455 478 - -
Ahy20g1751 994 SMART LRR_sd22_2 136 162 - -
Ahy20g1751 994 Pfam Leucine rich repeat 210 268 IPR001611 GO:0005515
Ahy20g1751 994 Pfam Leucine rich repeat 505 563 IPR001611 GO:0005515
Ahy20g1751 994 PANTHER - 16 990 - -
Ahy20g1751 994 Gene3D Ribonuclease Inhibitor 22 179 IPR032675 -
Ahy20g1751 994 SUPERFAMILY L domain-like 23 295 - -
Ahy20g1751 994 Gene3D Phosphorylase Kinase; domain 1 658 759 - -
Ahy20g1751 994 PRINTS Leucine-rich repeat signature 139 152 - -
Ahy20g1751 994 PRINTS Leucine-rich repeat signature 526 539 - -
Ahy20g1751 994 Pfam Protein tyrosine and serine/threonine kinase 678 896 IPR001245 GO:0004672|GO:0006468
Ahy20g1751 994 SUPERFAMILY Protein kinase-like (PK-like) 655 979 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1751 Ahy-Chr20 92698704 92703179 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g1751 24 992 Receptor kinase-like Gene Family AT3G47570 41.270 0.0 692
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Ahy20g1751 PK_Tyr_Ser-Thr 1.20E-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1751 - - gmx:100776054 1208.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g1751 20 92698704 92703179 Ahy10g1350 10 73439004 73442415 hybridization